RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 WLSQ5T9L3 541 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 TMEM215Q68D42 235 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 ELMSAN1Q6PJG2 1045 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 NAT16Q8N8M0 369 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 KDM1BQ8NB78 822 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 CNDP1Q96KN2 507 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 FAM161BQ96MY7 647 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 THTPAQ9BU02 230 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 RNPEPL1Q9HAU8 725 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 GTSE1Q9NYZ3 720 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 VTI1BQ9UEU0 232 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 PLA2G4CQ9UP65 541 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 VPS9D1Q9Y2B5 631 aa18.16■□□□□ 0.5
COL9A3-205ENST00000466192 CAPN8A6NHC0 703 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 H0Y3Z8 333 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 GAPDHSO14556 408 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CLGNO14967 610 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 POU2F2P09086 479 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 PKMP14618 531 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 COPAP53621 1224 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 ERVK-21P61565 698 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CACNG1Q06432 222 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 KPNB1Q14974 876 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 DNAL1Q4LDG9 190 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 METTL21CQ5VZV1 264 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 TAS2R42Q7RTR8 314 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 GIMAP7Q8NHV1 300 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 WDR60Q8WVS4 1066 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 EXT2Q93063 718 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CLPTM1LQ96KA5 538 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 GPR21Q99679 349 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 C1orf21Q9H246 121 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 PIDD1Q9HB75 910 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 DPP7Q9UHL4 492 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 ZMYM5Q9UJ78 669 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 MCM8Q9UJA3 840 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 G3BP2Q9UN86 482 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 FIS1Q9Y3D6 152 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 A8MX80 341 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 SLCO1B7G3V0H7 640 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 NIPSNAP2O75323 286 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CPOXP36551 454 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CCNHP51946 323 aaPredicted RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 SLC25A3Q00325 362 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 OR4D1Q15615 310 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 KHDC1Q4VXA5 237 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 DPY19L3Q6ZPD9 716 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 ACAD11Q709F0 780 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 SMG7Q92540 1137 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 ECHDC3Q96DC8 303 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CMTM5Q96DZ9 223 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 SLC30A3Q99726 388 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 MARK1Q9P0L2 795 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 CDYLQ9Y232 598 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 YBX2Q9Y2T7 364 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 OAS3Q9Y6K5 1087 aaKnown RBP18.15■□□□□ 0.5
COL9A3-205ENST00000466192 SLC30A1Q9Y6M5 507 aa18.15■□□□□ 0.5
COL9A3-205ENST00000466192 PFDN6O15212 129 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 ANP32DO95626 131 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 EZRP15311 586 aaKnown RBP18.14■□□□□ 0.49
COL9A3-205ENST00000466192 CA5AP35218 305 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SERPINB5P36952 375 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SEMG2Q02383 582 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SHHQ15465 462 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 CARD16Q5EG05 197 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 AARS2Q5JTZ9 985 aaKnown RBP18.14■□□□□ 0.49
COL9A3-205ENST00000466192 NXNQ6DKJ4 435 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 FAM151BQ6UXP7 276 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 TMC5Q6UXY8 1006 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 TSPAN33Q86UF1 283 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SLC22A9Q8IVM8 553 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 PCDH20Q8N6Y1 951 aaKnown RBP18.14■□□□□ 0.49
COL9A3-205ENST00000466192 OTUB2Q96DC9 234 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 TUBGCP5Q96RT8 1024 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 CEP44Q9C0F1 390 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SUV39H2Q9H5I1 410 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 ZDHHC6Q9H6R6 413 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SYTL2Q9HCH5 934 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 PLXNB3Q9ULL4 1909 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 NPIPB15A6NHN6 443 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-205ENST00000466192 MAGEC1O60732 1142 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 PTGER3P43115 390 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SULT2A1Q06520 285 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 KLF10Q13118 480 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 MYO9BQ13459 2157 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 ACSBG2Q5FVE4 666 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 Q6ZVU0 165 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 KIAA0907Q7Z7F0 614 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SCUBE1Q8IWY4 988 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 CHST14Q8NCH0 376 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 RSPRY1Q96DX4 576 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 CCDC97Q96F63 343 aaPredicted RBP18.14■□□□□ 0.49
COL9A3-205ENST00000466192 SAMD11Q96NU1 681 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 TNFRSF12AQ9NP84 129 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 IL26Q9NPH9 171 aa18.14■□□□□ 0.49
COL9A3-205ENST00000466192 TM7SF2O76062 418 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 PRAMEF1O95521 474 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 PBX2P40425 430 aa18.13■□□□□ 0.49
COL9A3-205ENST00000466192 ADARP55265 1226 aaKnown RBP18.13■□□□□ 0.49
COL9A3-205ENST00000466192 DMC1Q14565 340 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms