RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 SEPT6Q14141 434 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 MORF4L2Q15014 288 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 SHBQ15464 509 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 TPRG1LQ5T0D9 272 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 KDM7AQ6ZMT4 941 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 PHYKPLQ8IUZ5 450 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 BBOF1Q8ND07 529 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 OR2I1PQ8NGU4 316 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 SAP25Q8TEE9 199 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 SCARF2Q96GP6 870 aaPredicted RBP16.82■□□□□ 0.28
USP39-211ENST00000465282 MRM3Q9HC36 420 aaKnown RBP16.82■□□□□ 0.28
USP39-211ENST00000465282 TRIM39Q9HCM9 518 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 PIH1D1Q9NWS0 290 aaKnown RBP16.82■□□□□ 0.28
USP39-211ENST00000465282 SPASTQ9UBP0 616 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 TCAF1Q9Y4C2 921 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 CEP250Q9BV73 2442 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 PLXNB3Q9ULL4 1909 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 DNAH14Q0VDD8 3507 aa16.82■□□□□ 0.28
USP39-211ENST00000465282 PRSS38A1L453 326 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 AGAP14A8MT82 685 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 BUD23O43709 281 aaKnown RBP16.81■□□□□ 0.28
USP39-211ENST00000465282 VEGFDO43915 354 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 PIAS2O75928 621 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 SRP72O76094 671 aaKnown RBP16.81■□□□□ 0.28
USP39-211ENST00000465282 PRAMEF1O95521 474 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 CEACAM5P06731 702 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 IVLP07476 585 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 SESN2P58004 480 aaPredicted RBP16.81■□□□□ 0.28
USP39-211ENST00000465282 C2orf54Q08AI8 447 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 CHRNA6Q15825 494 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 ALG11Q2TAA5 492 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 UAP1L1Q3KQV9 507 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 GPR33Q49SQ1 333 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 ATP13A5Q4VNC0 1218 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 LDLRAP1Q5SW96 308 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 PRAMEF14Q5SWL7 426 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 TSTD2Q5T7W7 516 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 ANKRD22Q5VYY1 191 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 FAM151BQ6UXP7 276 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 ZNF534Q76KX8 674 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 CAND1Q86VP6 1230 aaKnown RBP16.81■□□□□ 0.28
USP39-211ENST00000465282 PHACTR4Q8IZ21 702 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 FSTL5Q8N475 847 aaPredicted RBP16.81■□□□□ 0.28
USP39-211ENST00000465282 OR13C4Q8NGS5 318 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 ZNF398Q8TD17 642 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 SNF8Q96H20 258 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 CDKN2AIPNLQ96HQ2 116 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 ERP44Q9BS26 406 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 RTKNQ9BST9 563 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 APOBEC3BQ9UH17 382 aaKnown RBP16.81■□□□□ 0.28
USP39-211ENST00000465282 KCTD3Q9Y597 815 aa16.81■□□□□ 0.28
USP39-211ENST00000465282 COL5A1P20908 1838 aaPredicted RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 SDR42E2A6NKP2 422 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 EFCAB8A8MWE9 144 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 GAPDHSO14556 408 aaPredicted RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 TM4SF5O14894 197 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 INPP4BO15327 924 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 TMEM63AO94886 807 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 CD59P13987 128 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 DGKAP23743 735 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 GRK6P43250 576 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 MAGEA3P43357 314 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 XIAPP98170 497 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 ACVR1Q04771 509 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 NFATC2Q13469 925 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 PTPRCAPQ14761 206 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 ELOCQ15369 112 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 IZUMO3Q5VZ72 239 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 KANSL1Q7Z3B3 1105 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 SNX20Q7Z614 316 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 HID1Q8IV36 788 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 HEXDCQ8WVB3 486 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 OR1E3Q8WZA6 343 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 TSACCQ96A04 125 aaPredicted RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 ULK4Q96C45 1275 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 SGSM3Q96HU1 749 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 DNAJC1Q96KC8 554 aaKnown RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 SERPINB12Q96P63 405 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 KIFC1Q9BW19 673 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 ZCCHC2Q9C0B9 1178 aaKnown RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 ASB8Q9H765 288 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 FGF22Q9HCT0 170 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 TRNAU1APQ9NX07 287 aaKnown RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 KLF15Q9UIH9 416 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 FKBPLQ9UIM3 349 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 UTP11Q9Y3A2 253 aaKnown RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 SLC30A1Q9Y6M5 507 aa16.8■□□□□ 0.28
USP39-211ENST00000465282 ZFC3H1O60293 1989 aaKnown RBP16.8■□□□□ 0.28
USP39-211ENST00000465282 TPP1O14773 563 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 SCAMP1O15126 338 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 AQP9O43315 295 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 ZNF500O60304 480 aaPredicted RBP16.79■□□□□ 0.28
USP39-211ENST00000465282 SEC31AO94979 1220 aaKnown RBP16.79■□□□□ 0.28
USP39-211ENST00000465282 ASMTLO95671 621 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 CTSEP14091 401 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 ITGALP20701 1170 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 BNIP3Q12983 259 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 PEX6Q13608 980 aa16.79■□□□□ 0.28
USP39-211ENST00000465282 CCDC38Q502W7 563 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms