RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 OR2T3Q8NH03 318 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 RPLP0P6Q8NHW5 317 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 C1orf54Q8WWF1 131 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 MAGOHBQ96A72 148 aaKnown RBP5.68□□□□□ -1.5
PTPN12-209ENST00000460731 MRGPRX1Q96LB2 322 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 RUNDC3BQ96NL0 473 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 SORCS2Q96PQ0 1159 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 PPP1R2P1Q96PQ5 205 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 TRIB3Q96RU7 358 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 C19orf43Q9BQ61 176 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 HEPHQ9BQS7 1158 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 TMEM121Q9BTD3 319 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 AP1M1Q9BXS5 423 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 POLR1EQ9GZS1 481 aaKnown RBP5.68□□□□□ -1.5
PTPN12-209ENST00000460731 PRDM14Q9GZV8 571 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 MKRN2Q9H000 416 aaKnown RBP5.68□□□□□ -1.5
PTPN12-209ENST00000460731 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.68□□□□□ -1.54e-11■■■■□ 23.1
PTPN12-209ENST00000460731 NOD2Q9HC29 1040 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 GLOD4Q9HC38 313 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 ITM2CQ9NQX7 267 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 SMARCAL1Q9NZC9 954 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 SUSD2Q9UGT4 822 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 SCML1Q9UN30 329 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 NDRG2Q9UN36 371 aaKnown RBP5.68□□□□□ -1.5
PTPN12-209ENST00000460731 RPL26L1Q9UNX3 145 aaKnown RBP5.68□□□□□ -1.5
PTPN12-209ENST00000460731 SLC8A2Q9UPR5 921 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 VPS13AQ96RL7 3174 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 ABCA7Q8IZY2 2146 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 OTOGLQ3ZCN5 2332 aa5.68□□□□□ -1.5
PTPN12-209ENST00000460731 EP300Q09472 2414 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CABIN1Q9Y6J0 2220 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 GOLGA6L10A0A0M3HER8 536 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 ERI2A8K979 691 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 H7C0C1 242 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 AREL1O15033 823 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 INSIG1O15503 277 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 SOCS5O75159 536 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 URI1O94763 535 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 SUN1O94901 812 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 METTL18O95568 372 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 PF4P02776 101 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 HLA-DQB2P05538 268 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 HLA-EP13747 358 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 GABRG2P18507 467 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 C5AR1P21730 350 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 RPL22P35268 128 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 DRD3P35462 400 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CTSKP43235 329 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 ATP5OP48047 213 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 KCNJ1P48048 391 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CXCL12P48061 93 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CCR3P51677 355 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CCNHP51946 323 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 RPS14P62263 151 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CDK16Q00536 496 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 SATB1Q01826 763 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CREB5Q02930 508 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 AP1B1Q10567 949 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 SEMA5AQ13591 1074 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 DHX34Q14147 1143 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CDKN3Q16667 212 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 FNDC3BQ53EP0 1204 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 ZNF805Q5CZA5 627 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 HEATR6Q6AI08 1181 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 DENND5AQ6IQ26 1287 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 SDE2Q6IQ49 451 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CCDC137Q6PK04 289 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 KDELC1Q6UW63 502 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 USP30Q70CQ3 517 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 PID1Q7Z2X4 250 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 ADAT2Q7Z6V5 191 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 LSRQ86X29 649 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 TMPRSS6Q8IU80 811 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 RAVER1Q8IY67 606 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 STK40Q8N2I9 435 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 BBS5Q8N3I7 341 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CCDC33Q8N5R6 958 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 FAM71DQ8N9W8 422 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 GLIS1Q8NBF1 620 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 CHST14Q8NCH0 376 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 NSMCE1Q8WV22 266 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 PIH1D2Q8WWB5 315 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 OR8D1Q8WZ84 308 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 OXNAD1Q96HP4 312 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 GDAP1L1Q96MZ0 367 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 MCCC1Q96RQ3 725 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 JMJD8Q96S16 334 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 LYSMD1Q96S90 227 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 FAM118BQ9BPY3 351 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 FERMT1Q9BQL6 677 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 FAM126AQ9BYI3 521 aaPredicted RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 GBA3Q9H227 469 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 MTG2Q9H4K7 406 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 C10orf88Q9H8K7 445 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 PCDH9Q9HC56 1237 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 HAUS2Q9NVX0 235 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 USP36Q9P275 1121 aaKnown RBP5.67□□□□□ -1.5
PTPN12-209ENST00000460731 PAK5Q9P286 719 aa5.67□□□□□ -1.5
PTPN12-209ENST00000460731 HECAQ9UBI9 543 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms