RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 VPS4BO75351 444 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CXCL14O95715 111 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CD160O95971 181 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 PKMP14618 531 aaKnown RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 SP100P23497 879 aaPredicted RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 MPSTP25325 297 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 ATP4BP51164 291 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CDKN2DP55273 166 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 SNRPD1P62314 119 aaKnown RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 DLX2Q07687 328 aaPredicted RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 HYAL1Q12794 435 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CBX2Q14781 532 aaPredicted RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 PLEKHG6Q3KR16 790 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 ZNF789Q5FWF6 425 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 PDE12Q6L8Q7 609 aaKnown RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 C16orf89Q6UX73 402 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 RINLQ6ZS11 566 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 ISCA2Q86U28 154 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 PLPP6Q8IY26 295 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 LSMEM2Q8N112 164 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CCNYL1Q8N7R7 359 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 KDM1BQ8NB78 822 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 MDGA1Q8NFP4 955 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 LYSMD1Q96S90 227 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CCT7Q99832 543 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 C1QTNF3Q9BXJ4 246 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 MEAF6Q9HAF1 191 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 MRPL40Q9NQ50 206 aaKnown RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 CD207Q9UJ71 328 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 TRMT6Q9UJA5 497 aaKnown RBP14.04□□□□□ -0.16
ERCC3-205ENST00000460485 HS3ST2Q9Y278 367 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 KCTD3Q9Y597 815 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 SLC30A1Q9Y6M5 507 aa14.04□□□□□ -0.16
ERCC3-205ENST00000460485 DCHS1Q96JQ0 3298 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 LOC730098B7Z3J9 87 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 SLC9A3R1O14745 358 aaPredicted RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GRM6O15303 877 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GRID2O43424 1007 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 SNAP91O60641 907 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 XYLBO75191 536 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 PEX11AO75192 247 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 FKBP6O75344 327 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 CHRNGP07510 517 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 FGF4P08620 206 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 LINC00271P0C7V0 271 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 COX4I1P13073 169 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 NCF2P19878 526 aaPredicted RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 ITGALP20701 1170 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 MZF1P28698 734 aaPredicted RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 AVPR2P30518 371 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 MC4RP32245 332 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GCKP35557 465 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 KDSRQ06136 332 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 SIGLEC14Q08ET2 396 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 USP4Q13107 963 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 KLF10Q13118 480 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 ADAM15Q13444 863 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 UBAP2LQ14157 1087 aaKnown RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GPR33Q49SQ1 333 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 CMPK2Q5EBM0 449 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GPR158Q5T848 1215 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 PCDH20Q8N6Y1 951 aaKnown RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 KLHL23Q8NBE8 558 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GRIN3AQ8TCU5 1115 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 AUTS2Q8WXX7 1259 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 PDLIM5Q96HC4 596 aaKnown RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 PRR11Q96HE9 360 aaPredicted RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 SERPINI1Q99574 410 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 SLC2A11Q9BYW1 496 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GPR63Q9BZJ6 419 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 DENND2DQ9H6A0 471 aaPredicted RBP14.03□□□□□ -0.16
ERCC3-205ENST00000460485 ZNF385DQ9H6B1 395 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 GTSE1Q9NYZ3 720 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 IL17CQ9P0M4 197 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 SLC25A13Q9UJS0 675 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 PLA2G4CQ9UP65 541 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 CRYL1Q9Y2S2 319 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 MYO15AQ9UKN7 3530 aa14.03□□□□□ -0.16
ERCC3-205ENST00000460485 A0A0J9YYE9 177 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 UBA6A0AVT1 1052 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 TTC24A2A3L6 582 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 RGSL1A5PLK6 1076 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 CAPN8A6NHC0 703 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 LEFTY2O00292 366 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 EIF3FO00303 357 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 PRMT5O14744 637 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 CCNT2O60583 730 aaKnown RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 TRBC1P01850 177 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 ZNF7P17097 686 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 PTPN2P17706 415 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 CA8P35219 290 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 BMPR1AP36894 532 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 VASPP50552 380 aaPredicted RBP14.02□□□□□ -0.17
ERCC3-205ENST00000460485 CYP4F8P98187 520 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 BTKQ06187 659 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 SQLEQ14534 574 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 SLC9B1Q4ZJI4 515 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 ZNF678Q5SXM1 525 aa14.02□□□□□ -0.17
ERCC3-205ENST00000460485 GRAMD4Q6IC98 578 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms