RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 ZNF607Q96SK3 696 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 TDRD1Q9BXT4 1180 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 CHRAC1Q9NRG0 131 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 TRNAU1APQ9NX07 287 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 KLRG2A4D1S0 409 aaPredicted RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 MAP2K7O14733 419 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 SSR2P43308 183 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 PABPC1LQ4VXU2 614 aaKnown RBP19.59■□□□□ 0.73
SNX27-204ENST00000458013 FAM156AQ8NDB6 213 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 XAGE5Q8WWM1 108 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 LRRC4CQ9HCJ2 640 aa19.59■□□□□ 0.73
SNX27-204ENST00000458013 CDK18Q07002 472 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 TAPT1Q6NXT6 567 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 NAPRTQ6XQN6 538 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 OR2L5Q8NG80 312 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 MTFR1LQ9H019 292 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 LRRC19Q9H756 370 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 ZNF214Q9UL59 606 aaPredicted RBP19.58■□□□□ 0.73
SNX27-204ENST00000458013 DEPDC5O75140 1603 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 PTPRUQ92729 1446 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 TLL1O43897 1013 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 USP41Q3LFD5 358 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 LYPLAL1Q5VWZ2 237 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 RASSF6Q6ZTQ3 369 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 HJURPQ8NCD3 748 aaPredicted RBP19.58■□□□□ 0.73
SNX27-204ENST00000458013 DNAJC19Q96DA6 116 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 NMUR1Q9HB89 426 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 NOBOXO60393 691 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 SNAP91O60641 907 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 IDO1P14902 403 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 AZGP1P25311 298 aaKnown RBP19.58■□□□□ 0.73
SNX27-204ENST00000458013 DSC2Q02487 901 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 RNASEH2BQ5TBB1 312 aaKnown RBP19.58■□□□□ 0.73
SNX27-204ENST00000458013 SLC30A6Q6NXT4 461 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 ZNF248Q8NDW4 579 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 PCDH18Q9HCL0 1135 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 VWA7Q9Y334 891 aa19.58■□□□□ 0.73
SNX27-204ENST00000458013 RPTORQ8N122 1335 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 CXCL11O14625 94 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 ERN1O75460 977 aaKnown RBP19.58■□□□□ 0.72
SNX27-204ENST00000458013 SERPINA1P01009 418 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 SPDYCQ5MJ68 293 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 ADGRG6Q86SQ4 1221 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 FAM81AQ8TBF8 368 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 TWIST2Q8WVJ9 160 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 CNPPD1Q9BV87 410 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 NR2E3Q9Y5X4 410 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 H3BSH0 61 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 HDAC3O15379 428 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 SKP1P63208 163 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 OGFOD2Q6N063 350 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 LRRC55Q6ZSA7 311 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 RIOX2Q8IUF8 465 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 FCF1Q9Y324 198 aaKnown RBP19.58■□□□□ 0.72
SNX27-204ENST00000458013 ACTL7BQ9Y614 415 aa19.58■□□□□ 0.72
SNX27-204ENST00000458013 ZFP37Q9Y6Q3 630 aaPredicted RBP19.58■□□□□ 0.72
SNX27-204ENST00000458013 CYP3A4P08684 503 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 HSF2Q03933 536 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 SLC1A5Q15758 541 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 ZBTB6Q15916 424 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 UNC93AQ86WB7 457 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 SPATA22Q8NHS9 363 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 KLK6Q92876 244 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 DUSP16Q9BY84 665 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 TNFRSF8P28908 595 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 BCAP31P51572 246 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 SNAPC1Q16533 368 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 PRSS58Q8IYP2 241 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 LNX2Q8N448 690 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 FIBCD1Q8N539 461 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 LRTOMTQ8WZ04 291 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 ESAMQ96AP7 390 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 ZNF670Q9BS34 389 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 PLGRKTQ9HBL7 147 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 TMCO1Q9UM00 188 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 SMAD9O15198 467 aaKnown RBP19.57■□□□□ 0.72
SNX27-204ENST00000458013 OR1D2P34982 312 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 OAZ1P54368 228 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 C2orf80Q0P641 193 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 ITGA7Q13683 1181 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 ZNF879B4DU55 563 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 GLYATQ6IB77 296 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 PAOXQ6QHF9 649 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 CHST4Q8NCG5 386 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 OSBPL11Q9BXB4 747 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 ELAC1Q9H777 363 aaKnown RBP19.57■□□□□ 0.72
SNX27-204ENST00000458013 FBXO5Q9UKT4 447 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 BNIP2Q12982 314 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 FBXO42Q6P3S6 717 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 TXNDC11Q6PKC3 985 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 OAFQ86UD1 273 aa19.57■□□□□ 0.72
SNX27-204ENST00000458013 PHF13Q86YI8 300 aaPredicted RBP19.57■□□□□ 0.72
SNX27-204ENST00000458013 ZNF483Q8TF39 744 aaPredicted RBP19.57■□□□□ 0.72
SNX27-204ENST00000458013 ELNP15502 786 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 CORO1AP31146 461 aaKnown RBP19.56■□□□□ 0.72
SNX27-204ENST00000458013 HSPA7P48741 367 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 NR1H2P55055 460 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 ZBTB2Q8N680 514 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 PHF12Q96QT6 1004 aa19.56■□□□□ 0.72
SNX27-204ENST00000458013 TBX5Q99593 518 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms