RNA–Protein interactions for RNA: ENST00000454859.7

ECHDC1-210, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECHDC1, Length 2,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-210ENST00000454859 PHTF2Q8N3S3 785 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 RYBPQ8N488 228 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TRAM1L1Q8N609 369 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CFAP61Q8NHU2 1237 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 RIN3Q8TB24 985 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 GDPD5Q8WTR4 605 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 DNASE1L2Q92874 299 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SCYL1Q96KG9 808 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 EXOC2Q96KP1 924 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 BIRC8Q96P09 236 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TMEM237Q96Q45 408 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 RDH14Q9HBH5 336 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 MARCH4Q9P2E8 410 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 THAP10Q9P2Z0 257 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 LNPEPQ9UIQ6 1025 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CLEC4EQ9ULY5 219 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SCML1Q9UN30 329 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SLC12A4Q9UP95 1085 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 WASF2Q9Y6W5 498 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 GPR89AB7ZAQ6 455 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ANHXE9PGG2 379 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 K7ERQ8 282 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 NRG2O14511 850 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 VPS4BO75351 444 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PIAS1O75925 651 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 RHOBTB1O94844 696 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 HSPA4LO95757 839 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 APODP05090 189 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SERPINA6P08185 405 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 FGF4P08620 206 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 GPR89BP0CG08 455 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CCDC166P0CW27 439 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CD1DP15813 335 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 XPAP23025 273 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PBX2P40425 430 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PIK3CGP48736 1102 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CDKL1Q00532 357 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PTPRNQ16849 979 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 GAB4Q2WGN9 574 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ACCSLQ4AC99 568 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TMEM52BQ4KMG9 183 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ZRANB3Q5FWF4 1079 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PPM1JQ5JR12 505 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 CGB2Q6NT52 195 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ZNF549Q6P9A3 640 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 RBM23Q86U06 439 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ISCA2Q86U28 154 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PLD6Q8N2A8 252 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TCAIMQ8N3R3 496 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PAF1Q8N7H5 531 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PBXIP1Q96AQ6 731 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 VOPP1Q96AW1 172 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ZNF514Q96K75 400 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TM6SF2Q9BZW4 377 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 ZCCHC2Q9C0B9 1178 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 SMG9Q9H0W8 520 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 TMEM245Q9H330 911 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 C8orf33Q9H7E9 229 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 MLXIPLQ9NP71 852 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 IL26Q9NPH9 171 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 PLK2Q9NYY3 685 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 FKBPLQ9UIM3 349 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 KCTD3Q9Y597 815 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 COL4A3Q01955 1670 aa6.79□□□□□ -1.32
ECHDC1-210ENST00000454859 HDAC3O15379 428 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PRAMEF1O95521 474 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 MLYCDO95822 493 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 OR56A5P0C7T3 313 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 MPC1LP0DKB6 136 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 BPIP17213 487 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 VCLP18206 1134 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SLC8A1P32418 973 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 RPL14P50914 215 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 HERVK_113P63132 956 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 DPTQ07507 201 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ACTN3Q08043 901 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SP140Q13342 867 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 GEN1Q17RS7 908 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 TCEAL5Q5H9L2 206 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 CFAP157Q5JU67 520 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 PLEKHS1Q5SXH7 462 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 VITQ6UXI7 678 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 FAM47EQ6ZV65 393 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 KCTD4Q8WVF5 259 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ING5Q8WYH8 240 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 SKA1Q96BD8 255 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ZBTB9Q96C00 473 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 NXNL1Q96CM4 212 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 MSLNLQ96KJ4 702 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 DCBLD2Q96PD2 775 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 RAB3IPQ96QF0 476 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 OLFM1Q99784 485 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 TRMT61BQ9BVS5 477 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ERVK-6Q9BXR3 956 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 MYLK2Q9H1R3 596 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 MMADHCQ9H3L0 296 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ZDHHC6Q9H6R6 413 aa6.78□□□□□ -1.32
ECHDC1-210ENST00000454859 ASB8Q9H765 288 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms