RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 SF3A2Q15428 464 aaKnown RBP12.95□□□□□ -0.34
VPS33A-202ENST00000451053 BBS9Q3SYG4 887 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 ZDHHC20Q5W0Z9 365 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 CES3Q6UWW8 571 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 ADAMTSL4Q6UY14 1074 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TRIM74Q86UV6 250 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 HEATR4Q86WZ0 1026 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 SPATS2Q86XZ4 545 aaKnown RBP12.95□□□□□ -0.34
VPS33A-202ENST00000451053 ZBED8Q8IZ13 594 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 OR13J1Q8NGT2 312 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 PYROXD1Q8WU10 500 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 STYXQ8WUJ0 223 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 FUBP1Q96AE4 644 aaKnown RBP12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TRIM56Q9BRZ2 755 aaKnown RBP12.95□□□□□ -0.34
VPS33A-202ENST00000451053 KIFC1Q9BW19 673 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 LGR4Q9BXB1 951 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TEX101Q9BY14 249 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 WDR26Q9H7D7 661 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 SUDS3Q9H7L9 328 aaPredicted RBP12.95□□□□□ -0.34
VPS33A-202ENST00000451053 PARD6AQ9NPB6 346 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 SAMD15Q9P1V8 674 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 TMPRSS11EQ9UL52 423 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 RIMKLBQ9ULI2 386 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 SLC6A14Q9UN76 642 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 SOX13Q9UN79 622 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 ANKRD6Q9Y2G4 727 aa12.95□□□□□ -0.34
VPS33A-202ENST00000451053 PCDH15Q96QU1 1955 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 MAGEB16A2A368 324 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 OR51F1A6NGY5 319 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 SPAG6O75602 509 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 PRAMEF1O95521 474 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 ZNF806P0C7X5 589 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 HADHAP40939 763 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 KIAA1024LP59773 190 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 YPEL5P62699 121 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 CDK3Q00526 305 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 ACVR1Q04771 509 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 OVGP1Q12889 678 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 GRIK2Q13002 908 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 PEX6Q13608 980 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 SKIDA1Q1XH10 827 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 KIF19Q2TAC6 998 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 ATP13A5Q4VNC0 1218 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 HP1BP3Q5SSJ5 553 aaPredicted RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 CASC4Q6P4E1 433 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 NLRP9Q7RTR0 991 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 HDXQ7Z353 690 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 IGDCC3Q8IVU1 814 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 FAM174AQ8TBP5 190 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 MFSD3Q96ES6 412 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 CDKN2AIPNLQ96HQ2 116 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 TBATAQ96M53 351 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 C19orf43Q9BQ61 176 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 WDR83Q9BRX9 315 aaKnown RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 ZSCAN5AQ9BUG6 496 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 TXLNGYQ9BZA5 131 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 CAAP1Q9H8G2 361 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 MRM3Q9HC36 420 aaKnown RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 PHPT1Q9NRX4 125 aaPredicted RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 TREX1Q9NSU2 369 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 SEMA4GQ9NTN9 838 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 CNOT6Q9ULM6 557 aaKnown RBP12.94□□□□□ -0.34
VPS33A-202ENST00000451053 SNX11Q9Y5W9 270 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 MAD1L1Q9Y6D9 718 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 GON4LQ3T8J9 2241 aa12.94□□□□□ -0.34
VPS33A-202ENST00000451053 GPR179Q6PRD1 2367 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 SPTY2D1-AS1A0A0U1RR47 76 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 CCDC162PA2VCL2 907 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 H7C0S8 307 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 CACNB4O00305 520 aaPredicted RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 TOR1BO14657 336 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 KHNYNO15037 678 aaKnown RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A9O60656 530 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 SRP72O76094 671 aaKnown RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PYGLP06737 847 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 GSTA2P09210 222 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PRSS56P0CW18 603 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 MYCLP1P12525 358 aaPredicted RBP12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A6P19224 532 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A1P22309 533 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A4P22310 534 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 TGM1P22735 817 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 MC4RP32245 332 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PHBP35232 272 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A3P35503 534 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UGT1A5P35504 534 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 CTSKP43235 329 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 THOP1P52888 689 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 FZD2Q14332 565 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 NFATC4Q14934 902 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PRAMEF14Q5SWL7 426 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PDPK2PQ6A1A2 396 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 PALM2Q8IXS6 379 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 OR2I1PQ8NGU4 316 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 ZNF398Q8TD17 642 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 DTX3LQ8TDB6 740 aa12.93□□□□□ -0.34
VPS33A-202ENST00000451053 UBLCP1Q8WVY7 318 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms