RNA–Protein interactions for RNA: ENST00000448893.1

RHBDF1-205, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 901 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-205ENST00000448893 VPS16Q9H269 839 aa11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 NOD2Q9HC29 1040 aa11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 CPNE7Q9UBL6 633 aa11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 CNOT8Q9UFF9 292 aaKnown RBP11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 SRPK3Q9UPE1 567 aa11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 PRKAB1Q9Y478 270 aa11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 PCYT1BQ9Y5K3 369 aaPredicted RBP11.95□□□□□ -0.5
RHBDF1-205ENST00000448893 SHANK1Q9Y566 2161 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 KIR2DS5A0A0G2JLQ3 304 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 A0A0G2JNG1 304 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 A6NCN8 305 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 OR5K4A6NMS3 321 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 KIR2DS3K7RE56 304 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 TOX3O15405 576 aaPredicted RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 SNX2O60749 519 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 MT-ND3P03897 115 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 CALB1P05937 261 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 FGF5P12034 268 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 CTPS1P17812 591 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 GARSP41250 739 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 PGDP52209 483 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 MRPL49Q13405 166 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 DNASE1L3Q13609 305 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 KIR2DS5Q14953 304 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 CA9Q16790 459 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 TP53INP2Q8IXH6 220 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 SRRM1Q8IYB3 904 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 PGBD5Q8N414 524 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 MLKLQ8NB16 471 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 PIH1D2Q8WWB5 315 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 THAP4Q8WY91 577 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 ELMO2Q96JJ3 720 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 DHX35Q9H5Z1 703 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 LHX9Q9NQ69 397 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 GPATCH2LQ9NWQ4 482 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 OGFRQ9NZT2 677 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 CHMP5Q9NZZ3 219 aa11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 CNOT6Q9ULM6 557 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 PCDHGA9Q9Y5G4 932 aaKnown RBP11.94□□□□□ -0.5
RHBDF1-205ENST00000448893 ABCA12Q86UK0 2595 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 MN1Q10571 1320 aaPredicted RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 TNRC6AQ8NDV7 1962 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 ANKRD62A6NC57 917 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 EIF3CLB5ME19 914 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 C21orf140B9A014 251 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PES1O00541 588 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 GADD45BO75293 160 aaPredicted RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PGLSO95336 258 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PEX11BO96011 259 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 LDLRP01130 860 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 ATP1A1P05023 1023 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PYGLP06737 847 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PDHA1P08559 390 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 F3P13726 295 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 SLC2A4P14672 509 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 TYRP1P17643 537 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 XRCC1P18887 633 aaPredicted RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 ELAVL4P26378 380 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 VARSP26640 1264 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 TNFRSF8P28908 595 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 SOX5P35711 763 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 HSPA9P38646 679 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 SEPHS1P49903 392 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 GFERP55789 205 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 TRAF2Q12933 501 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 CLEC16AQ2KHT3 1053 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PPP1R15BQ5SWA1 713 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 ERMARDQ5T6L9 678 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 TMCO4Q5TGY1 634 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PAPD7Q5XG87 772 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 RFX8Q6ZV50 586 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 ZNF765Q7L2R6 523 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 CT55Q8WUE5 264 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 SEC14L1Q92503 715 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 PLEKHG4BQ96PX9 1271 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 EIF3CQ99613 913 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 HERPUD2Q9BSE4 406 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 RIOK2Q9BVS4 552 aaKnown RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 GPR87Q9BY21 358 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 AKIRIN1Q9H9L7 192 aaPredicted RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 UCK1Q9HA47 277 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 ERRFI1Q9UJM3 462 aaPredicted RBP11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 AP4E1Q9UPM8 1137 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 KCNK6Q9Y257 313 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 CSMD1Q96PZ7 3565 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 MED13Q9UHV7 2174 aa11.93□□□□□ -0.5
RHBDF1-205ENST00000448893 HIVEP3Q5T1R4 2406 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 LILRA5A6NI73 299 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 AMD1P17707 334 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 CASP14P31944 242 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 HCAR3P49019 387 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 UBE2IP63279 158 aaKnown RBP11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 OGDHQ02218 1023 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 CAMK4Q16566 473 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 UGT8Q16880 541 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 HSP90AA4PQ58FG1 418 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 RALGPS1Q5JS13 557 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 ARMC12Q5T9G4 340 aa11.92□□□□□ -0.5
RHBDF1-205ENST00000448893 LRRC66Q68CR7 880 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms