RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 ERVW-1Q9UQF0 538 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 COLQQ9Y215 455 aaPredicted RBP17.6■□□□□ 0.41
LMNA-208ENST00000448611 COMMD10Q9Y6G5 202 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 SCN8AQ9UQD0 1980 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 SLCO1B7G3V0H7 640 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 NIPSNAP2O75323 286 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 VPS26AO75436 327 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 PYGLP06737 847 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 ESRRAP11474 423 aaPredicted RBP17.6■□□□□ 0.41
LMNA-208ENST00000448611 BPIP17213 487 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 AOC1P19801 751 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 IMPDH1P20839 514 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 NRIP1P48552 1158 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 GEN1Q17RS7 908 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 PPP2R2DQ66LE6 453 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 CRTC1Q6UUV9 634 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 TSPAN33Q86UF1 283 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 PLPP6Q8IY26 295 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 CBARPQ8N350 705 aaPredicted RBP17.6■□□□□ 0.41
LMNA-208ENST00000448611 CHST14Q8NCH0 376 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 OR2A12Q8NGT7 310 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 STON2Q8WXE9 905 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 KCNJ9Q92806 393 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 KIAA1191Q96A73 305 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 MRGPRX3Q96LB0 322 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 MCCC1Q96RQ3 725 aaPredicted RBP17.6■□□□□ 0.41
LMNA-208ENST00000448611 MIPEPQ99797 713 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 NKX2-4Q9H2Z4 354 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 SLC28A3Q9HAS3 691 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 APPL1Q9UKG1 709 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 ZNF106Q9H2Y7 1883 aaKnown RBP17.6■□□□□ 0.41
LMNA-208ENST00000448611 ATG2AQ2TAZ0 1938 aa17.6■□□□□ 0.41
LMNA-208ENST00000448611 NUP210Q8TEM1 1887 aaPredicted RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 WASH3PC4AMC7 463 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 CYP17A1P05093 508 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 MTHFD2P13995 350 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 HNRNPLP14866 589 aaKnown RBP eCLIP17.59■□□□□ 0.41
LMNA-208ENST00000448611 POLR2EP19388 210 aaKnown RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 CA5AP35218 305 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 ATP6V0D1P61421 351 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 RAD51Q06609 339 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 NFATC2Q13469 925 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 TPRG1Q6ZUI0 275 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 FRMD7Q6ZUT3 714 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 SNX20Q7Z614 316 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 VN1R2Q8NFZ6 395 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 GIMAP7Q8NHV1 300 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 CD200R1Q8TD46 325 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 OSCP1Q8WVF1 389 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.59■□□□□ 0.413e-6■■■■■ 49
LMNA-208ENST00000448611 BTBD10Q9BSF8 475 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 GSTO2Q9H4Y5 243 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 DUS2Q9NX74 493 aaKnown RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 IKZF3Q9UKT9 509 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 STK38LQ9Y2H1 464 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 TRBV5-4A0A0C4DH59 114 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 A8MX80 341 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 SMIM24O75264 130 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 TSPAN12O95859 305 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 UGT2B4P06133 528 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 ENO1P06733 434 aaKnown RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 CISD3P0C7P0 127 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 TPBGLP0DKB5 382 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 VIPR2P41587 438 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 GALNT1Q10472 559 aaPredicted RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 KCNC3Q14003 757 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 EML3Q32P44 896 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 ZNF678Q5SXM1 525 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 METTL21CQ5VZV1 264 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 RINLQ6ZS11 566 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 SERPINA9Q86WD7 417 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 NKAPQ8N5F7 415 aaKnown RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 SIDT2Q8NBJ9 832 aaKnown RBP17.59■□□□□ 0.41
LMNA-208ENST00000448611 FRS2Q8WU20 508 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 SORCS1Q8WY21 1168 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 OR52B2Q96RD2 323 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 TAGLN3Q9UI15 199 aa17.59■□□□□ 0.41
LMNA-208ENST00000448611 GLYATL1P3A0A0U1RQE8 302 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 PRMT5O14744 637 aaPredicted RBP17.58■□□□□ 0.4
LMNA-208ENST00000448611 KERAO60938 352 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 JUNP05412 331 aaKnown RBP17.58■□□□□ 0.4
LMNA-208ENST00000448611 ITGALP20701 1170 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 HNRNPH1P31943 449 aaKnown RBP17.58■□□□□ 0.4
LMNA-208ENST00000448611 SPAM1P38567 509 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 TCEAL5Q5H9L2 206 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 LRRC66Q68CR7 880 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 TRIM68Q6AZZ1 485 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 GRAMD4Q6IC98 578 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 USP45Q70EL2 814 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 RPS27LQ71UM5 84 aaKnown RBP17.58■□□□□ 0.4
LMNA-208ENST00000448611 LONP2Q86WA8 852 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 NPAS3Q8IXF0 933 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 PARP9Q8IXQ6 854 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 STAG3L4Q8TBR4 150 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 CYB5D2Q8WUJ1 264 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 CCDC97Q96F63 343 aaPredicted RBP17.58■□□□□ 0.4
LMNA-208ENST00000448611 ASB8Q9H765 288 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 SFXN1Q9H9B4 322 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 TCF7L2Q9NQB0 619 aa17.58■□□□□ 0.4
LMNA-208ENST00000448611 TAS2R1Q9NYW7 299 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms