RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 THSD1Q9NS62 852 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 DTLQ9NZJ0 730 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 RNF14Q9UBS8 474 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 AMACRQ9UHK6 382 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 CHKBQ9Y259 395 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 AHCTF1Q8WYP5 2266 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 A0A0U1RQS6 177 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 DDX3YO15523 660 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 JCHAINP01591 159 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 HOXC4P09017 264 aaPredicted RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 GM2AP17900 193 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 ITPKBP27987 946 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PAFAH1B1P43034 410 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 LSSP48449 732 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 CDK3Q00526 305 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 AP1B1Q10567 949 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 DOK6Q6PKX4 331 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 VSIG1Q86XK7 387 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 RCOR2Q8IZ40 523 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 PQLC3Q8N755 202 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 LPCAT1Q8NF37 534 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 SNIP1Q8TAD8 396 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 MAIP1Q8WWC4 291 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 MAML1Q92585 1016 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 KRT35Q92764 455 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 CCDC74AQ96AQ1 378 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 ZNF578Q96N58 590 aaPredicted RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 GFM1Q96RP9 751 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 TDRD1Q9BXT4 1180 aaKnown RBP8.73□□□□□ -1.01
USP6NL-203ENST00000443016 SATB2Q9UPW6 733 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 LRRK1Q38SD2 2015 aa8.73□□□□□ -1.01
USP6NL-203ENST00000443016 A0A0J9YYE9 177 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ESYT3A0FGR9 886 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 APOL1O14791 398 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CEP104O60308 925 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 TRBC1P01850 177 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 RPLP0P05388 317 aaKnown RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 HLA-DQB2P05538 268 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ZNF30P17039 623 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ATF4P18848 351 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 GNPDA1P46926 289 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 MARCKSL1P49006 195 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 PCBP4P57723 403 aaKnown RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 DYNLT1P63172 113 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 SLC10A2Q12908 348 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 WHAMMP3Q1A5X7 153 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 C1QTNF12Q5T7M4 302 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 Q8N9G6 341 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ZNF248Q8NDW4 579 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 SCAMP4Q969E2 229 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 FAF2Q96CS3 445 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 HDAC11Q96DB2 347 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 TEX101Q9BY14 249 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 PCDH9Q9HC56 1237 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 SEPT10Q9P0V9 454 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 DNPEPQ9ULA0 475 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ATMQ13315 3056 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 UNC13CQ8NB66 2214 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 EIF4E1BA6NMX2 242 aaKnown RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 PRSS47A8MTI9 375 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ZNF487B1APH4 448 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 PGRMC1O00264 195 aaKnown RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CASC3O15234 703 aaKnown RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 FZD6O60353 706 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 GLB1P16278 677 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ZFXP17010 805 aaPredicted RBP8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CD86P42081 329 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 PPP2R5EQ16537 467 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 TFDP3Q5H9I0 405 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 SLC30A9Q6PML9 568 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 RFX6Q8HWS3 928 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ARL14Q8N4G2 192 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 MNS1Q8NEH6 495 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CCL4L1Q8NHW4 92 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CCHCR1Q8TD31 782 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ALG3Q92685 438 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CRELD1Q96HD1 420 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 SMIM14Q96QK8 99 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ADGRE3Q9BY15 652 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 GSDMCQ9BYG8 508 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 FOXP3Q9BZS1 431 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 EPB41L5Q9HCM4 733 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 LRIT1Q9P2V4 623 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 CDC23Q9UJX2 597 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 SUFUQ9UMX1 484 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 PPIL1Q9Y3C6 166 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ENTPD2Q9Y5L3 495 aa8.72□□□□□ -1.01
USP6NL-203ENST00000443016 ADAMTS20P59510 1910 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 GOLGA6L10A0A0M3HER8 536 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 C1orf232A0A0U1RR37 186 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 PPP1R12AO14974 1030 aaPredicted RBP8.71□□□□□ -1.01
USP6NL-203ENST00000443016 ASMTLO95671 621 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 CEACAM5P06731 702 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 PYGLP06737 847 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 CXCR5P32302 372 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 PTPN7P35236 360 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 PPM1FP49593 454 aaPredicted RBP8.71□□□□□ -1.01
USP6NL-203ENST00000443016 ERVPABLB-1P60509 514 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 PTSQ03393 145 aa8.71□□□□□ -1.01
USP6NL-203ENST00000443016 DPTQ07507 201 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms