RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 EID3Q8N140 333 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 WDR36Q8NI36 951 aaKnown RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 PDLIM2Q96JY6 352 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 GPR21Q99679 349 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 EBNA1BP2Q99848 306 aaKnown RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 C1orf50Q9BV19 199 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 GBA3Q9H227 469 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 C8orf33Q9H7E9 229 aaPredicted RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 POLR3BQ9NW08 1133 aaPredicted RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 NCANO14594 1321 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 UBXN7O94888 489 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 GBE1Q04446 702 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 SGCBQ16585 318 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 LPCAT2Q7L5N7 544 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 TMC3Q7Z5M5 1100 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 TMEM126BQ8IUX1 230 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 SLC43A3Q8NBI5 491 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 RELTQ969Z4 430 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 EXOSC8Q96B26 276 aaKnown RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 TPSD1Q9BZJ3 242 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 FZD10Q9ULW2 581 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 NAA20P61599 178 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 FRG1Q14331 258 aaKnown RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 KYQ8NBH2 561 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 DNASE1L2Q92874 299 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 SMARCD2Q92925 531 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 CNBD2Q96M20 576 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 WRAP73Q9P2S5 460 aaPredicted RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 COG5Q9UP83 839 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 ACTL7BQ9Y614 415 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 TMEM265A0A087WTH1 108 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 GRIA4P48058 902 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 IL5RAQ01344 420 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 C1DQ13901 141 aaKnown RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 PANX1Q96RD7 426 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 APOBEC3GQ9HC16 384 aaKnown RBP12.03□□□□□ -0.48
NEK1-201ENST00000439128 TMBIM4Q9HC24 238 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 GDF3Q9NR23 364 aa12.03□□□□□ -0.48
NEK1-201ENST00000439128 CASP9P55211 416 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 CYP4F3Q08477 520 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 ANXA8L1Q5VT79 327 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 CAMK1DQ8IU85 385 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 ZNF786Q8N393 782 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 CDADC1Q9BWV3 514 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 LDAHQ9H6V9 325 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 CAB39LQ9H9S4 337 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 ANKHQ9HCJ1 492 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.48
NEK1-201ENST00000439128 PITPNM1O00562 1244 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 CNOT3O75175 753 aaKnown RBP12.02□□□□□ -0.48
NEK1-201ENST00000439128 OR6B1O95007 311 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 PIK3R1P27986 724 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 AVL9Q8NBF6 648 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 FAM3CQ92520 227 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 ATOH1Q92858 354 aaPredicted RBP12.02□□□□□ -0.48
NEK1-201ENST00000439128 RNF145Q96MT1 663 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 RAB11FIP5Q9BXF6 653 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 SLITRK2Q9H156 845 aa12.02□□□□□ -0.48
NEK1-201ENST00000439128 A8MUI8 341 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 SNAP91O60641 907 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ALADP13716 330 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 JUPP14923 745 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ATXN1P54253 815 aaKnown RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 MAPKAPK3Q16644 382 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 FAM220AQ7Z4H9 259 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 GPR180Q86V85 440 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 UGT2B28Q9BY64 529 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 HAO1Q9UJM8 370 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 CORO2BQ9UQ03 480 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 NQO1P15559 274 aaKnown RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 RAD23AP54725 363 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 MRPL28Q13084 256 aaKnown RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 RFTN1Q14699 578 aaPredicted RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 MED27Q6P2C8 311 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 GCNT7Q6ZNI0 430 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ITFG1Q8TB96 612 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 MR1Q95460 341 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 TLR10Q9BXR5 811 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 BCL2L14Q9BZR8 327 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 PCBD2Q9H0N5 130 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 HMGXB4Q9UGU5 601 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ZNF490Q9ULM2 529 aaPredicted RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 SAC3D1A6NKF1 404 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 TPD52L2O43399 206 aaKnown RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
NEK1-201ENST00000439128 GOT2P00505 430 aaKnown RBP12.02□□□□□ -0.49
NEK1-201ENST00000439128 ITGA2BP08514 1039 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 NEK2P51955 445 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ARHGAP40Q5TG30 622 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 DEFB107AQ8IZN7 70 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 SLC22A18Q96BI1 424 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 C8orf48Q96LL4 319 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 XPR1Q9UBH6 696 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ZNF229Q9UJW7 825 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 SCML2Q9UQR0 700 aa12.02□□□□□ -0.49
NEK1-201ENST00000439128 ALPIP09923 528 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 PSMC3P17980 439 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 ELOCQ15369 112 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 DENND6AQ8IWF6 608 aa12.01□□□□□ -0.49
NEK1-201ENST00000439128 CADM2Q8N3J6 435 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms