RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 GRB14Q14449 540 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 RBBP7Q16576 425 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 FSCN1Q16658 493 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 AARS2Q5JTZ9 985 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 C16orf87Q6PH81 154 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ELMSAN1Q6PJG2 1045 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TBPL2Q6SJ96 375 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 NUDT8Q8WV74 236 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 BRI3BPQ8WY22 251 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TMEM125Q96AQ2 219 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 COG8Q96MW5 612 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TRIM62Q9BVG3 475 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CHID1Q9BWS9 393 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ING2Q9H160 280 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ADNPQ9H2P0 1102 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 SMOC2Q9H3U7 446 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 RPF2Q9H7B2 306 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ZFYVE28Q9HCC9 887 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TBC1D23Q9NUY8 699 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 INTS7Q9NVH2 962 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 OSER1Q9NX31 292 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TUBA8Q9NY65 449 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 GALPQ9UBC7 116 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 A0A1W2PP18 115 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 BOLA2-SMG1P6H3BVE0 249 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CDC7O00311 574 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PAPSS2O95340 614 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ALBP02768 609 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CYBBP04839 570 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 GPIP06744 558 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF37AP17032 561 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 FDXRP22570 491 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 MAP4P27816 1152 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 ELK4P28324 431 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 CCR3P51677 355 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 TBX4P57082 545 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 RAP1GAP2Q684P5 730 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PHYKPLQ8IUZ5 450 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 LRRC43Q8N309 656 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 NAT16Q8N8M0 369 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 BIRC7Q96CA5 298 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 FAM210AQ96ND0 272 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 SARS2Q9NP81 518 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 SUN2Q9UH99 717 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 EVLQ9UI08 416 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PTBP2Q9UKA9 531 aaKnown RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 PCDHA9Q9Y5H5 950 aa7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 MAGED1Q9Y5V3 778 aaPredicted RBP7.49□□□□□ -1.21
SMARCC1-202ENST00000425518 MROH6A6NGR9 719 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 J3QRK9 145 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SNX2O60749 519 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC22A3O75751 556 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ZNF182P17025 639 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 HOXC13P31276 330 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 RPL9P32969 192 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 RFC2P35250 354 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ACVRL1P37023 503 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 GPR15P49685 360 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 C21orf59P57076 290 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 LCP2Q13094 533 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CCL14Q16627 93 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SLC39A12Q504Y0 691 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 KANK2Q63ZY3 851 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 OGFOD2Q6N063 350 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 STK32CQ86UX6 486 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CLEC4FQ8N1N0 589 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 PGBD5Q8N414 524 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 OR4L1Q8NH43 312 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 STAG3L4Q8TBR4 150 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 FBXL8Q96CD0 374 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 PPM1MQ96MI6 270 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 MUS81Q96NY9 551 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SERPINB11Q96P15 392 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 RPRD1AQ96P16 312 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ASB2Q96Q27 587 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 HGH1Q9BTY7 390 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ZYG11BQ9C0D3 744 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CATSPERZQ9NTU4 200 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 GPR45Q9Y5Y3 372 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 UNCXA6NJT0 531 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 BTN3A1O00481 513 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 TNPO2O14787 897 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SYNCRIPO60506 623 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 TSPAN3O60637 253 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 SNAP91O60641 907 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ECI2O75521 394 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 ZBTB11O95625 1053 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 CHEK2O96017 543 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 FCGR1AP12314 374 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 UGT1A1P22309 533 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 UGT1A4P22310 534 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 NR4A1P22736 598 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 UGT1A3P35503 534 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 UGT1A5P35504 534 aa7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 TPD52P55327 224 aaPredicted RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 MRPS6P82932 125 aaKnown RBP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 TIAL1Q01085 375 aaKnown RBP eCLIP7.48□□□□□ -1.21
SMARCC1-202ENST00000425518 EIF4EBP2Q13542 120 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms