RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 P2RY2P41231 377 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PTGER3P43115 390 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PSMD8P48556 350 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 METAP1P53582 386 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 TPI1P60174 286 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 RPS14P62263 151 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 PRR5P85299 388 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CREB5Q02930 508 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ENPP2Q13822 863 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 SPIDRQ14159 915 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 SF3A2Q15428 464 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 ZRSR2Q15696 482 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 SLC18A3Q16572 532 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ASTE1Q2TB18 679 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 PGS1Q32NB8 556 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 HNRNPA1L2Q32P51 320 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 PLK5Q496M5 336 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 C5orf22Q49AR2 442 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 C4orf46Q504U0 113 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 MANEALQ5VSG8 457 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PMS2CLQ68D20 193 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 TXNRD3NBQ6F5E7 133 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 LAIR1Q6GTX8 287 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PPP1R2P3Q6NXS1 205 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CYP4V2Q6ZWL3 525 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 MMAAQ8IVH4 418 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 SLC41A1Q8IVJ1 513 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 STK40Q8N2I9 435 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ZNF557Q8N988 423 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 TC2NQ8N9U0 490 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ATP11CQ8NB49 1132 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 FAM156AQ8NDB6 213 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 OR2T3Q8NH03 318 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 OR14C36Q8NHC7 312 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ZNF564Q8TBZ8 553 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 GANCQ8TET4 914 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CTNNBL1Q8WYA6 563 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 RUBCNQ92622 972 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 PRCCQ92733 491 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 FATE1Q969F0 183 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 NTAN1Q96AB6 310 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 TBC1D31Q96DN5 1066 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ALG14Q96F25 216 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 SIPA1Q96FS4 1042 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CELF6Q96J87 481 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 C1orf74Q96LT6 269 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CCDC42Q96M95 316 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 GPR174Q9BXC1 333 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ACE2Q9BYF1 805 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 KLC2Q9H0B6 622 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 TMEM245Q9H330 911 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 MRPL47Q9HD33 250 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 FSCN3Q9NQT6 498 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 C19orf73Q9NVV2 129 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 CTTNBP2NLQ9P2B4 639 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 ZNF212Q9UDV6 495 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 VPS51Q9UID3 782 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 GMEB2Q9UKD1 530 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 OR51B4Q9Y5P0 310 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 EP300Q09472 2414 aaPredicted RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 RIF1Q5UIP0 2472 aaKnown RBP4.96□□□□□ -1.62
VPS41-205ENST00000414632 FAM186AA6NE01 2351 aa4.96□□□□□ -1.62
VPS41-205ENST00000414632 GVINP1Q7Z2Y8 2422 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 PCDH15Q96QU1 1955 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 EDDM13A0A1B0GTR0 161 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 FAM47DPA6NHR8 397 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 DFFAO00273 331 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 NPC1O15118 1278 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 MID1O15344 667 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 DAPK3O43293 454 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 HTRA2O43464 458 aaPredicted RBP4.95□□□□□ -1.62
VPS41-205ENST00000414632 UBXN7O94888 489 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 EPN2O95208 641 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 IL1BP01584 269 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 DNTTP04053 509 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 PROCP04070 461 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 CYP1A2P05177 515 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 SRPRAP08240 638 aaKnown RBP4.95□□□□□ -1.62
VPS41-205ENST00000414632 CD48P09326 243 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 H2AFZP0C0S5 128 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 RAC2P15153 192 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 DESP17661 470 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 SDHBP21912 280 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 GKP32189 559 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 ACSL1P33121 698 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 CNR2P34972 360 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 THBS2P35442 1172 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 MPLP40238 635 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 DNA2P51530 1060 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 TPMTP51580 245 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 TAS2R40P59535 323 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 KRT83P78385 493 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 ARF5P84085 180 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 GNA12Q03113 381 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 SCAPQ12770 1279 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 MALLQ13021 153 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 SEMA3BQ13214 749 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 SLC12A1Q13621 1099 aa4.95□□□□□ -1.62
VPS41-205ENST00000414632 MESDQ14696 234 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms