RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 REXO1L1PQ8IX06 675 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 GALNT15Q8N3T1 639 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 TRIM58Q8NG06 486 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 MAPK15Q8TD08 544 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 PATE1Q8WXA2 126 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 ABCG4Q9H172 646 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 CARD9Q9H257 536 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 SYNDIG1Q9H7V2 258 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 PIH1D1Q9NWS0 290 aaKnown RBP13.04□□□□□ -0.32
SSB-203ENST00000413002 ZNHIT2Q9UHR6 403 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 RABGEF1Q9UJ41 708 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 METRNQ9UJH8 293 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 TMPRSS11EQ9UL52 423 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 ZNF148Q9UQR1 794 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 AAR2Q9Y312 384 aaKnown RBP13.04□□□□□ -0.32
SSB-203ENST00000413002 ARL5AQ9Y689 179 aa13.04□□□□□ -0.32
SSB-203ENST00000413002 GOLGA4Q13439 2230 aaKnown RBP13.04□□□□□ -0.32
SSB-203ENST00000413002 TRBV23OR9-2A0A075B6M9 112 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 EME2A4GXA9 379 aaPredicted RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 RGSL1A5PLK6 1076 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 NOBOXO60393 691 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A9O60656 530 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 SLC25A14O95258 325 aaPredicted RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 IFNB1P01574 187 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 FGGP02679 453 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 IVLP07476 585 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 TPH1P17752 444 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A6P19224 532 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A1P22309 533 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A4P22310 534 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A3P35503 534 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A5P35504 534 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 HMGCLP35914 325 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 RPIAP49247 311 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 ILF3Q12906 894 aaKnown RBP eCLIP13.03□□□□□ -0.32
SSB-203ENST00000413002 ILKQ13418 452 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 SIX1Q15475 284 aaPredicted RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 OASLQ15646 514 aaKnown RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 PARP6Q2NL67 630 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 ATP13A5Q4VNC0 1218 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 KHDC1Q4VXA5 237 aaKnown RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 PYCR3Q53H96 274 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 ZNF569Q5MCW4 686 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 DENND5AQ6IQ26 1287 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 LVRNQ6Q4G3 990 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 FAM151BQ6UXP7 276 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 CHST15Q7LFX5 561 aaPredicted RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 TMPRSS12Q86WS5 348 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 TRAM1L1Q8N609 369 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 PDCD7Q8N8D1 485 aaKnown RBP13.03□□□□□ -0.32
SSB-203ENST00000413002 ARL10Q8N8L6 244 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 GLIS1Q8NBF1 620 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 GPBAR1Q8TDU6 330 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 GLMNQ92990 594 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 OR2M4Q96R27 311 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 TBL1YQ9BQ87 522 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 OR2AG1Q9H205 316 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A7Q9HAW7 530 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A10Q9HAW8 530 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 UGT1A8Q9HAW9 530 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 IL26Q9NPH9 171 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 IL17CQ9P0M4 197 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 TAAR2Q9P1P5 351 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 ATXN10Q9UBB4 475 aa13.03□□□□□ -0.32
SSB-203ENST00000413002 LRP4O75096 1905 aa13.02□□□□□ -0.32
SSB-203ENST00000413002 TRABD2BA6NFA1 517 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 CCL22O00626 93 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 DNAJC6O75061 913 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 MT-CO3P00414 261 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 PYGLP06737 847 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 ZSCAN5DPP0CG00 497 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 ZNF8P17098 575 aaPredicted RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 ACTR1BP42025 376 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 MAZP56270 477 aaKnown RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 ACTR1AP61163 376 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 TMPRSS15P98073 1019 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 E2F1Q01094 437 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 CAMK2BQ13554 666 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 CHRNA6Q15825 494 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 CRTC3Q6UUV7 619 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 GALNT13Q8IUC8 556 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 RAVER1Q8IY67 606 aaKnown RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 Q8N9G6 341 aaPredicted RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 GPR156Q8NFN8 814 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 GDAP1Q8TB36 358 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 MDM1Q8TC05 714 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 NAT14Q8WUY8 206 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 ANP32BQ92688 251 aaKnown RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 GLYATL1Q969I3 302 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 CCDC74AQ96AQ1 378 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 SCARF2Q96GP6 870 aaPredicted RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 SRPK1Q96SB4 655 aaKnown RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 CCDC3Q9BQI4 270 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 ZSCAN5AQ9BUG6 496 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 GSDMCQ9BYG8 508 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 TRABDQ9H4I3 376 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 EVA1BQ9NVM1 165 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 TRNAU1APQ9NX07 287 aaKnown RBP13.02□□□□□ -0.33
SSB-203ENST00000413002 KCNK6Q9Y257 313 aa13.02□□□□□ -0.33
SSB-203ENST00000413002 PCDHB1Q9Y5F3 818 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms