RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CDC25CP30307 473 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 SHMT1P34896 483 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 RYKP34925 604 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 ACAA2P42765 397 aaKnown RBP4.93□□□□□ -1.62
LSM5-205ENST00000409952 CAMLGP49069 296 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 GMFBP60983 142 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 SLC18A2Q05940 514 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 ACSM1Q08AH1 577 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 KLF10Q13118 480 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 TRA2AQ13595 282 aaKnown RBP eCLIP4.93□□□□□ -1.62
LSM5-205ENST00000409952 TUBA3CQ13748 450 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 TBC1D25Q3MII6 688 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 MDH1BQ5I0G3 518 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 C10orf76Q5T2E6 689 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 TMEM63BQ5T3F8 832 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 TBC1D9BQ66K14 1250 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 TUBA3EQ6PEY2 450 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 RHOUQ7L0Q8 258 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 LDB1Q86U70 411 aaPredicted RBP4.93□□□□□ -1.62
LSM5-205ENST00000409952 WDR5BQ86VZ2 330 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 DZIP1Q86YF9 867 aaKnown RBP4.93□□□□□ -1.62
LSM5-205ENST00000409952 CADM3Q8N126 398 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 DBF4BQ8NFT6 615 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 ST7LQ8TDW4 575 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 FAR1Q8WVX9 515 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 EXT2Q93063 718 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 FUBP1Q96AE4 644 aaKnown RBP4.93□□□□□ -1.62
LSM5-205ENST00000409952 PGBD1Q96JS3 809 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 LRRC3BQ96PB8 259 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 SORCS2Q96PQ0 1159 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 PLEKHG4BQ96PX9 1271 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 NUDCD1Q96RS6 583 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 ZNF347Q96SE7 839 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 HNRNPABQ99729 332 aaKnown RBP4.93□□□□□ -1.62
LSM5-205ENST00000409952 FRMD8Q9BZ67 464 aaPredicted RBP4.93□□□□□ -1.62
LSM5-205ENST00000409952 NYXQ9GZU5 481 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 NT5C3AQ9H0P0 336 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 VPS33BQ9H267 617 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 KCNK15Q9H427 330 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 C17orf75Q9HAS0 396 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 SLC28A3Q9HAS3 691 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 KLC4Q9NSK0 619 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 VPS18Q9P253 973 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 ANKFY1Q9P2R3 1169 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 SNX7Q9UNH6 387 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 STX8Q9UNK0 236 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 CEPT1Q9Y6K0 416 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 ATP8B3O60423 1300 aa4.93□□□□□ -1.62
LSM5-205ENST00000409952 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 FAM157AC9JC47 383 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 RNASET2O00584 256 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 SLC25A17O43808 307 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 LPXNO60711 386 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 RSL1D1O76021 490 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 CDKL5O76039 1030 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 SCAF4O95104 1147 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 LETM1O95202 739 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 ZWINTO95229 277 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 FSHBP01225 129 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 IFNB1P01574 187 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 APEHP13798 732 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 ITIH1P19827 911 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 MYF6P23409 242 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 DNASE1P24855 282 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 FPR3P25089 353 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 ADRA1BP35368 520 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 GDF5P43026 501 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 KCNJ1P48048 391 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 CENPAP49450 140 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 COPB1P53618 953 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 KCNJ10P78508 379 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 RESTQ13127 1097 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 CRHR2Q13324 411 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 MFSD13AQ14CX5 517 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 TRADDQ15628 312 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 VWC2Q2TAL6 325 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 LSM12Q3MHD2 195 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 ANXA2RQ3ZCQ2 193 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 ZNF789Q5FWF6 425 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 FBXO42Q6P3S6 717 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 VWA1Q6PCB0 445 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 WDR53Q7Z5U6 358 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 TMEM110Q86TL2 294 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 PAQR4Q8N4S7 273 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 TMEM217Q8N7C4 229 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 OR52N4Q8NGI2 321 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 OR8K5Q8NH50 307 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 OCC1Q8TAD7 63 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 HDAC7Q8WUI4 952 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 ROBO4Q8WZ75 1007 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 IP6K1Q92551 441 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 BCL2L2Q92843 193 aaPredicted RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 CELF1Q92879 486 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 SPSB1Q96BD6 273 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 EEF2KMTQ96G04 330 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 ZC3HAV1LQ96H79 300 aaKnown RBP4.92□□□□□ -1.62
LSM5-205ENST00000409952 PBKQ96KB5 322 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 SLITRK1Q96PX8 696 aa4.92□□□□□ -1.62
LSM5-205ENST00000409952 MXRA8Q9BRK3 442 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms