RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 GPR149Q86SP6 731 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF689Q96CS4 500 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 OLFM3Q96PB7 478 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 FERD3LQ96RJ6 166 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ASPSCR1Q9BZE9 553 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 MAGEE1Q9HCI5 957 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SEMA4BQ9NPR2 832 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 IMP3Q9NV31 184 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 AKAP7Q9P0M2 348 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 B4GALT6Q9UBX8 382 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 UBDO15205 165 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 FYNP06241 537 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 HMGA1P17096 107 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 NTSR1P30989 418 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SEMG2Q02383 582 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TMEM220Q6QAJ8 160 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF276Q8N554 614 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 RTP4Q96DX8 246 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 RIOK2Q9BVS4 552 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 MTMR10Q9NXD2 777 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SNX6Q9UNH7 406 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 CCT8L1PA6NM43 557 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 RGS14O43566 566 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 OTCP00480 354 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 THRAP10827 490 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 GNSP15586 552 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SLC6A4P31645 630 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 PDK4Q16654 411 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TEDDM1Q5T9Z0 273 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SPATA6LQ8N4H0 392 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF655Q8N720 491 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TERB1Q8NA31 727 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 CEP70Q8NHQ1 597 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 OXNAD1Q96HP4 312 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 AGAP2Q99490 1192 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TMEM120AQ9BXJ8 343 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 DOCK3Q8IZD9 2030 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 A0A088AWK7 358 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 LOC100653049A0A140TA62 436 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ANKDD1BA6NHY2 528 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 EVPLLA8MZ36 301 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TXNDC9O14530 226 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 KRT34O76011 436 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 ZNF10P21506 573 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 DRD1P21728 446 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 RPL34P49207 117 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SESN3P58005 492 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SIX1Q15475 284 aaPredicted RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 FAM78AQ5JUQ0 283 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 CFAP206Q8IYR0 622 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TEX9Q8N6V9 391 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 PIWIL2Q8TC59 973 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 SIGLEC10Q96LC7 697 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 HAUS8Q9BT25 410 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 TDRD1Q9BXT4 1180 aaKnown RBP8.23□□□□□ -1.09
PTPRD-204ENST00000397606 Q9H521 79 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 RMND5AQ9H871 391 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 PLLPQ9Y342 182 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 COLEC10Q9Y6Z7 277 aa8.23□□□□□ -1.09
PTPRD-204ENST00000397606 AIM2O14862 343 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 B4GALT3O60512 393 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TCEA3O75764 348 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 RASGRP1O95267 797 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 IL4RP24394 825 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 COPAP53621 1224 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ACAP2Q15057 778 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TCEA2Q15560 299 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 QPCTQ16769 361 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 MUM1Q2TAK8 710 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ANO7Q6IWH7 933 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TRPC4APQ8TEL6 797 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 NSL1Q96IY1 281 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 QRFPRQ96P65 431 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 NELL2Q99435 816 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 SSU72Q9NP77 194 aaKnown RBP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 OBP2AQ9NY56 170 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 PGM1P36871 562 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 CHRNA6Q15825 494 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 MFSD6LQ8IWD5 586 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 HIPK4Q8NE63 616 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 KLK6Q92876 244 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 NXPE3Q969Y0 559 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 MRGPRX2Q96LB1 330 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 CRISPLD1Q9H336 500 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ORC6Q9Y5N6 252 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TTC34A8MYJ7 566 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 E9PBE3 544 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A9O60656 530 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 KLHL41O60662 606 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 MMP20O60882 483 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 LMNAP02545 664 aaKnown RBP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A6P19224 532 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A1P22309 533 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A4P22310 534 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 GLDCP23378 1020 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A3P35503 534 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A5P35504 534 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 PBX2P40425 430 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 HK2P52789 917 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms