RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 TSPAN6O43657 245 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3HP0C7X1 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 PXNP49023 591 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TPMTP51580 245 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TYSND1Q2T9J0 566 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 ZNF284Q2VY69 593 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TNFAIP8L3Q5GJ75 292 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 RBM20Q5T481 1227 aaKnown RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 ZDHHC20Q5W0Z9 365 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3GQ6DHY5 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3CQ6IPX1 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 CMC1Q7Z7K0 106 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 SPNS2Q8IVW8 549 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 TBC1D3Q8IZP1 549 aaPredicted RBP21.06■□□□□ 0.96
CPNE1-204ENST00000397443 PELI3Q8N2H9 469 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 FAM136AQ96C01 138 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 DTD2Q96FN9 168 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 SGSM3Q96HU1 749 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 ELMO2Q96JJ3 720 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 MCMBPQ9BTE3 642 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 SCML1Q9UN30 329 aa21.06■□□□□ 0.96
CPNE1-204ENST00000397443 FAM95CA0A1B0GW59 222 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 TPP1O14773 563 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 PLRG1O43660 514 aaKnown RBP21.05■□□□□ 0.96
CPNE1-204ENST00000397443 AP1G1O43747 822 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 KRT4P19013 534 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 MAT2AP31153 395 aaKnown RBP21.05■□□□□ 0.96
CPNE1-204ENST00000397443 FMO4P31512 558 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 TTPAP49638 278 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 DBN1Q16643 649 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 AARS2Q5JTZ9 985 aaKnown RBP21.05■□□□□ 0.96
CPNE1-204ENST00000397443 SLC41A1Q8IVJ1 513 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 GDAP1Q8TB36 358 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 BOCQ9BWV1 1114 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 TPSD1Q9BZJ3 242 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 FAM53CQ9NYF3 392 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 EBF1Q9UH73 591 aa21.05■□□□□ 0.96
CPNE1-204ENST00000397443 SPAG7O75391 227 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 ALDOAP04075 364 aaKnown RBP21.04■□□□□ 0.96
CPNE1-204ENST00000397443 PYGBP11216 843 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 CNTFP26441 200 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 SETMARQ53H47 684 aaPredicted RBP21.04■□□□□ 0.96
CPNE1-204ENST00000397443 HENMT1Q5T8I9 393 aaKnown RBP21.04■□□□□ 0.96
CPNE1-204ENST00000397443 C19orf43Q9BQ61 176 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 ZFR2Q9UPR6 939 aaKnown RBP21.04■□□□□ 0.96
CPNE1-204ENST00000397443 FADS2P1A8MWK0 482 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 K7ESM1 405 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 TM7SF2O76062 418 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 ACSL1P33121 698 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 GMPRP36959 345 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 PTPN5P54829 565 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 DCDC1P59894 354 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 MTAPQ13126 283 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 USP10Q14694 798 aaKnown RBP21.04■□□□□ 0.96
CPNE1-204ENST00000397443 USP30Q70CQ3 517 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 KBTBD6Q86V97 674 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 MTBPQ96DY7 904 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 SELENOSQ9BQE4 189 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 FZD4Q9ULV1 537 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 CYP8B1Q9UNU6 501 aa21.04■□□□□ 0.96
CPNE1-204ENST00000397443 A0A1W2PQU0 124 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 POLR3GO15318 223 aaPredicted RBP21.03■□□□□ 0.96
CPNE1-204ENST00000397443 INPP4BO15327 924 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 RNGTTO60942 597 aaKnown RBP21.03■□□□□ 0.96
CPNE1-204ENST00000397443 MTX2O75431 263 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 ACRV1P26436 265 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 TYK2P29597 1187 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 ITGA9Q13797 1035 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 ZNF460Q14592 562 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 RAET1GQ6H3X3 334 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 NXPE1Q8N323 547 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 LPGAT1Q92604 370 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 SMC6Q96SB8 1091 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 GPR22Q99680 433 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 CHRDQ9H2X0 955 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 KCNK9Q9NPC2 374 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 SNX15Q9NRS6 342 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 RAD18Q9NS91 495 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 PCMTD2Q9NV79 361 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 INTS10Q9NVR2 710 aaKnown RBP21.03■□□□□ 0.96
CPNE1-204ENST00000397443 TMPRSS11EQ9UL52 423 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 PLXNA2O75051 1894 aa21.03■□□□□ 0.96
CPNE1-204ENST00000397443 PFDN6O15212 129 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 RFPL1O75677 317 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 PAK4O96013 591 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-204ENST00000397443 GPR33Q49SQ1 333 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 PPM1JQ5JR12 505 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 ZNF648Q5T619 568 aaPredicted RBP21.02■□□□□ 0.96
CPNE1-204ENST00000397443 ZNF549Q6P9A3 640 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 KDM7AQ6ZMT4 941 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 NRSN1Q8IZ57 195 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 KRT222Q8N1A0 295 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 TRAM1L1Q8N609 369 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 TCF12Q99081 682 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 ZSCAN5AQ9BUG6 496 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 SLC13A1Q9BZW2 595 aa21.02■□□□□ 0.96
CPNE1-204ENST00000397443 TRBV5-4A0A0C4DH59 114 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 RGSL1A5PLK6 1076 aa21.02■□□□□ 0.95
CPNE1-204ENST00000397443 PHGDHO43175 533 aaKnown RBP21.02■□□□□ 0.95
CPNE1-204ENST00000397443 PCCBP05166 539 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms