RNA–Protein interactions for RNA: ENST00000397101.5

SEC13-205, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-205ENST00000397101 FLNCQ14315 2725 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 ZSCAN5CA6NGD5 496 aaPredicted RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 KCNK1O00180 336 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 NEMP1O14524 444 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 MATN3O15232 486 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 MAFKO60675 156 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 TM7SF2O76062 418 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 CD160O95971 181 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 JCHAINP01591 159 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 KRT14P02533 472 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 RPLP0P05388 317 aaKnown RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 CCL7P80098 99 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 MRPS25P82663 173 aaKnown RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 DHX34Q14147 1143 aaKnown RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 ZNF235Q14590 738 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 PRKD1Q15139 912 aaPredicted RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 OASLQ15646 514 aaKnown RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 PID1Q7Z2X4 250 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 GKN2Q86XP6 184 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 MMGT1Q8N4V1 131 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 KYQ8NBH2 561 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 VOPP1Q96AW1 172 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 TSGA13Q96PP4 275 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 CPEB1Q9BZB8 566 aaKnown RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 FOXP3Q9BZS1 431 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 SYNDIG1Q9H7V2 258 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 HAUS2Q9NVX0 235 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 KLHL8Q9P2G9 620 aaPredicted RBP13.66□□□□□ -0.22
SEC13-205ENST00000397101 PISDQ9UG56 409 aa13.66□□□□□ -0.22
SEC13-205ENST00000397101 SCN8AQ9UQD0 1980 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 TTI1O43156 1089 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 PRAMEF11O60813 436 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 GSRP00390 522 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 HGFP14210 728 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 CCNB1P14635 433 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 GLB1P16278 677 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 CR2P20023 1033 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 VPS41P49754 854 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 RENBPP51606 427 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 TERF1P54274 439 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 GEMIN4P57678 1058 aaKnown RBP13.65□□□□□ -0.22
SEC13-205ENST00000397101 MARC1Q5VT66 337 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 ARHGEF18Q6ZSZ5 1173 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 TAB3Q8N5C8 712 aaPredicted RBP13.65□□□□□ -0.22
SEC13-205ENST00000397101 TP53I13Q8NBR0 393 aaPredicted RBP13.65□□□□□ -0.22
SEC13-205ENST00000397101 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
SEC13-205ENST00000397101 GPR156Q8NFN8 814 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 CINPQ9BW66 212 aaPredicted RBP13.65□□□□□ -0.22
SEC13-205ENST00000397101 CEP41Q9BYV8 373 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 ZDHHC6Q9H6R6 413 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 RBM22Q9NW64 420 aaKnown RBP eCLIP13.65□□□□□ -0.227e-11■■■■■ 30.5
SEC13-205ENST00000397101 WDR70Q9NW82 654 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 GULP1Q9UBP9 304 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 ASIC3Q9UHC3 531 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 PCYOX1Q9UHG3 505 aa13.65□□□□□ -0.22
SEC13-205ENST00000397101 PRAMEF33A0A0G2JMD5 474 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 FAM187AA6NFU0 413 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 RAD51CO43502 376 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 PRAMEF10O60809 474 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 RASGRP1O95267 797 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 POP4O95707 220 aaKnown RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 CELA2BP08218 269 aaPredicted RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 RHOXF2BP0C7M4 288 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 CTSEP14091 401 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 ETS1P14921 441 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 MMP13P45452 471 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 SUOXP51687 545 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 GDF10P55107 478 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 SNRPD1P62314 119 aaKnown RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 TUBB4BP68371 445 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 LBRQ14739 615 aaKnown RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 CLCA4Q14CN2 919 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 TMCO4Q5TGY1 634 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 OGFOD3Q6PK18 319 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 SYDE1Q6ZW31 735 aaPredicted RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 PRUNE1Q86TP1 453 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.64□□□□□ -0.23
SEC13-205ENST00000397101 LRRN4CLQ8ND94 238 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 OR2AP1Q8NGE2 309 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 CCDC110Q8TBZ0 833 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 UBXN4Q92575 508 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 ZNF599Q96NL3 588 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 AGAP3Q96P47 875 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 VAT1Q99536 393 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 RHOXF2Q9BQY4 288 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 LRRC1Q9BTT6 524 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 TRIM31Q9BZY9 425 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 NT5MQ9NPB1 228 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 DKK3Q9UBP4 350 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 GGT7Q9UJ14 662 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 GPR34Q9UPC5 381 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 FCF1Q9Y324 198 aaKnown RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 UTP11Q9Y3A2 253 aaKnown RBP13.64□□□□□ -0.23
SEC13-205ENST00000397101 ACTL7AQ9Y615 435 aa13.64□□□□□ -0.23
SEC13-205ENST00000397101 TEX15Q9BXT5 2789 aa13.63□□□□□ -0.23
SEC13-205ENST00000397101 EFCAB8A8MWE9 144 aa13.63□□□□□ -0.23
SEC13-205ENST00000397101 C9orf172C9J069 976 aa13.63□□□□□ -0.23
SEC13-205ENST00000397101 F5H423 210 aaPredicted RBP13.63□□□□□ -0.23
SEC13-205ENST00000397101 ZSCAN5DPP0CG00 497 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms