RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 PCNAP12004 261 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 AP1S1P61966 158 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 PTK2BQ14289 1009 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 TAF1AQ15573 450 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 CCDC85BQ15834 202 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 RALGPS1Q5JS13 557 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 KIAA0408Q6ZU52 694 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 YTHDF3Q7Z739 585 aaKnown RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 RBFAQ8N0V3 343 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 FAM156AQ8NDB6 213 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 IRF7Q92985 503 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 SPDL1Q96EA4 605 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 FAM126AQ9BYI3 521 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 VCX3BQ9H321 246 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 AKAP10O43572 662 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 KRT36O76013 467 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 CDK14O94921 469 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 CDKN2DP55273 166 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 LSM12Q3MHD2 195 aaKnown RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 LRRC66Q68CR7 880 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 ZYG11AQ6WRX3 759 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 RINLQ6ZS11 566 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 RIPOR1Q6ZS17 1223 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 CHST14Q8NCH0 376 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 EEF1AKMT1Q8WVE0 214 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 C7orf26Q96N11 449 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 THUMPD3Q9BV44 507 aaKnown RBP15.12■□□□□ 0.01
MCF2L-205ENST00000397017 WBP1LQ9NX94 342 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 SHROOM3Q8TF72 1996 aa15.12■□□□□ 0.01
MCF2L-205ENST00000397017 RNASEH1O60930 286 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 POP4O95707 220 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 GGT5P36269 586 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 IDH3AP50213 366 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 TNK2Q07912 1038 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 TRAF7Q6Q0C0 670 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 ANKRD49Q8WVL7 239 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 N4BP2L2Q92802 583 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 AP2M1Q96CW1 435 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 KCNA7Q96RP8 456 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 VCXQ9H320 206 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 SSU72Q9NP77 194 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 CLDND1Q9NY35 253 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 HCFC2Q9Y5Z7 792 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 TRBV23OR9-2A0A075B6M9 112 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 H2AFYO75367 372 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 SEC22BO75396 215 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 HNF4AP41235 474 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 RPL34P49207 117 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 MCCD1P59942 119 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 CYTH1Q15438 398 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 STK40Q8N2I9 435 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 DCAF4L2Q8NA75 395 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 KYQ8NBH2 561 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 TXNDC5Q8NBS9 432 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 FAM83DQ9H4H8 585 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 RIC8BQ9NVN3 520 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 ZNF510Q9Y2H8 683 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 COQ6Q9Y2Z9 468 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 PRKAB1Q9Y478 270 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 PSMD12O00232 456 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 DGKAP23743 735 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 SPAM1P38567 509 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 ATAT1Q5SQI0 421 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 PHTF2Q8N3S3 785 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 OR56A4Q8NGH8 313 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 MFSD1Q9H3U5 465 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 GNPTGQ9UJJ9 305 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 RNF103-CHMP3A0A140T963 221 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 A8MT66 165 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 HSPA8P11142 646 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 FGF3P11487 239 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 CYP2A6P11509 494 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 COX4I1P13073 169 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 MAPK8P45983 427 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 ACBD5Q5T8D3 534 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 HEPHQ9BQS7 1158 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 KLF16Q9BXK1 252 aaPredicted RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 TDRD1Q9BXT4 1180 aaKnown RBP15.11■□□□□ 0.01
MCF2L-205ENST00000397017 GALPQ9UBC7 116 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 PSMD13Q9UNM6 376 aa15.11■□□□□ 0.01
MCF2L-205ENST00000397017 PLXNA1Q9UIW2 1896 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 TTC34A8MYJ7 566 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 WASH3PC4AMC7 463 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 NFYCQ13952 458 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 GPNMBQ14956 572 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 MAPRE2Q15555 327 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 KDELC1Q6UW63 502 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 KIAA1324Q6UXG2 1013 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 BNC2Q6ZN30 1099 aaPredicted RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 LIMS2Q7Z4I7 341 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 PIANPQ8IYJ0 282 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 ARRDC2Q8TBH0 407 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 DNAJB14Q8TBM8 379 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 NSUN5Q96P11 429 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 CCDC134Q9H6E4 229 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 CACNA2D2Q9NY47 1150 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 B4GALT6Q9UBX8 382 aa15.1■□□□□ 0.01
MCF2L-205ENST00000397017 DICER1Q9UPY3 1922 aaKnown RBP15.1■□□□□ 0.01
MCF2L-205ENST00000397017 AZIN1O14977 448 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms