RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SLC2A4RGQ9NR83 387 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 SMOXQ9NWM0 555 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 GALPQ9UBC7 116 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 ACOT9Q9Y305 439 aa12.64□□□□□ -0.39
TRIM39-204ENST00000396548 TCP11X1B4DZS4 312 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 LOC730098B7Z3J9 87 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PSMD11O00231 422 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ADRB3P13945 408 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PON2Q15165 354 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 TMEM52BQ4KMG9 183 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 HENMT1Q5T8I9 393 aaKnown RBP12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PIP5KL1Q5T9C9 394 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 CCDC91Q7Z6B0 441 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 IL17RCQ8NAC3 791 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 KCTD4Q8WVF5 259 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PBXIP1Q96AQ6 731 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ITM2BQ9Y287 266 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 VPS9D1Q9Y2B5 631 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 OAS3Q9Y6K5 1087 aaKnown RBP12.63□□□□□ -0.39
TRIM39-204ENST00000396548 A0A1W2PQF6 199 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 DNAJC6O75061 913 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ASGR2P07307 311 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 UGT1A6P19224 532 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 UGT1A1P22309 533 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 UGT1A4P22310 534 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PMLP29590 882 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 FMO4P31512 558 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 UGT1A3P35503 534 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 UGT1A5P35504 534 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 P2RY2P41231 377 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 B4GALNT1Q00973 533 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 LYPLAL1Q5VWZ2 237 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 MMAAQ8IVH4 418 aaKnown RBP12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 AADATQ8N5Z0 425 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF398Q8TD17 642 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 NXNL1Q96CM4 212 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 TSPAN17Q96FV3 270 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 MECRQ9BV79 373 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ASB8Q9H765 288 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 COMMD10Q9Y6G5 202 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 SLC30A1Q9Y6M5 507 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PLK4O00444 970 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 KPNA3O00505 521 aaPredicted RBP12.63□□□□□ -0.39
TRIM39-204ENST00000396548 NDUFS3O75489 264 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 IL1BP01584 269 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 SEC13P55735 322 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 E2F5Q15329 346 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 ATP13A5Q4VNC0 1218 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 KIAA1211LQ6NV74 962 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PIGWQ7Z7B1 504 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 NXPE1Q8N323 547 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 DYDC1Q8WWB3 177 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 PAIP2Q9BPZ3 127 aaKnown RBP12.63□□□□□ -0.39
TRIM39-204ENST00000396548 BOCQ9BWV1 1114 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 TLK1Q9UKI8 766 aa12.63□□□□□ -0.39
TRIM39-204ENST00000396548 SAT1P21673 171 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 DRD1P21728 446 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 ALDH3A1P30838 453 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 TIE1P35590 1138 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 ETV3P41162 512 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 CLCN7P51798 805 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 RAPH1Q70E73 1250 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 ERN2Q76MJ5 926 aaKnown RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 DSG4Q86SJ6 1040 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 GIMAP7Q8NHV1 300 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 HEXDCQ8WVB3 486 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 PPP1R16AQ96I34 528 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 SLC30A3Q99726 388 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 IQCGQ9H095 443 aaKnown RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 NMRAL1Q9HBL8 299 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 PKD2L2Q9NZM6 624 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 COPG2Q9UBF2 871 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 RUVBL2Q9Y230 463 aaKnown RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 PRSS21Q9Y6M0 314 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 ESR1P03372 595 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 FGF3P11487 239 aaPredicted RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 PKMP14618 531 aaKnown RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 FOSL2P15408 326 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 TAS2R38P59533 333 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 SATB1Q01826 763 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 TAF1BQ53T94 588 aaPredicted RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 ERAP2Q6P179 960 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 CYP2U1Q7Z449 544 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 NRSN1Q8IZ57 195 aa12.62□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF473Q8WTR7 871 aaKnown RBP12.62□□□□□ -0.39
TRIM39-204ENST00000396548 TSPAN12O95859 305 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 SOD1P00441 154 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ZNF37AP17032 561 aaPredicted RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ITGALP20701 1170 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 COL9A1P20849 921 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 NTSR1P30989 418 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 WASP42768 502 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 LIG3P49916 1009 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 RPS14P62263 151 aaKnown RBP12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CNTN1Q12860 1018 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 CCINQ13939 588 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 ARHGEF7Q14155 803 aa12.61□□□□□ -0.39
TRIM39-204ENST00000396548 AGBL4Q5VU57 503 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms