RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 E5RI56 91 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 UBFD1O14562 309 aaKnown RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 OR1I1O60431 355 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CCNT2O60583 730 aaKnown RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 TRBC1P01850 177 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 MTHFD2P13995 350 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 SERPINA4P29622 427 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CCR2P41597 374 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CCNG1P51959 295 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 EPHA5P54756 1037 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 ERVFC1P60507 584 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 ACTR3P61158 418 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 FPGSQ05932 587 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CYLC2Q14093 348 aaPredicted RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 PFKFB4Q16877 469 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 DEFB107AQ8IZN7 70 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CMTM8Q8IZV2 173 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 PELI3Q8N2H9 469 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 FBXO39Q8N4B4 442 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 TNKS2Q9H2K2 1166 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 ZBTB26Q9HCK0 441 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 STOML1Q9UBI4 398 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 INTS6Q9UL03 887 aaKnown RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 A0A0U1RQS6 177 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 C1orf232A0A0U1RR37 186 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 GOLGA8CPA6NN73 597 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 HIDE1A8MVS5 230 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 SLC34A2O95436 690 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 PRAMEF12O95522 483 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 NUDT2P50583 147 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 TBL3Q12788 808 aaKnown RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 TSNQ15631 228 aaKnown RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 ARHGAP15Q53QZ3 475 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 UGT3A1Q6NUS8 523 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 C16orf89Q6UX73 402 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CERS6Q6ZMG9 384 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.86□□□□□ -0.03
CBX3-202ENST00000396386 SIDT2Q8NBJ9 832 aaKnown RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 OR2AP1Q8NGE2 309 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CD200R1Q8TD46 325 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 LMLNQ96KR4 655 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 ANKRD27Q96NW4 1050 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 ZFYVE1Q9HBF4 777 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 CXXC1Q9P0U4 656 aaPredicted RBP14.86□□□□□ -0.03
CBX3-202ENST00000396386 CDH22Q9UJ99 828 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 TMCO1Q9UM00 188 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 PCDHB1Q9Y5F3 818 aa14.86□□□□□ -0.03
CBX3-202ENST00000396386 BTN3A1O00481 513 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 ECI2O75521 394 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 PRAMEF1O95521 474 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 SRCP12931 536 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 TSPAN8P19075 237 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 IL2P60568 153 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 SNRPD1P62314 119 aaKnown RBP14.85□□□□□ -0.03
CBX3-202ENST00000396386 SQLEQ14534 574 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 C22orf39Q6P5X5 142 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 FAM151BQ6UXP7 276 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 MRPL43Q8N983 215 aaKnown RBP14.85□□□□□ -0.03
CBX3-202ENST00000396386 GIMAP7Q8NHV1 300 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 EID2BQ96D98 161 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 LINGO1Q96FE5 620 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 RAD9AQ99638 391 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 SLC30A3Q99726 388 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 P2RY12Q9H244 342 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 STX18Q9P2W9 335 aaKnown RBP14.85□□□□□ -0.03
CBX3-202ENST00000396386 PRKAG2Q9UGJ0 569 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 SLC25A13Q9UJS0 675 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 IKZF3Q9UKT9 509 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 CCL26Q9Y258 94 aa14.85□□□□□ -0.03
CBX3-202ENST00000396386 CDC7O00311 574 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 PRMT5O14744 637 aaPredicted RBP14.84□□□□□ -0.03
CBX3-202ENST00000396386 GPR39O43194 453 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 PDE5AO76074 875 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 SIX3O95343 332 aaPredicted RBP14.84□□□□□ -0.03
CBX3-202ENST00000396386 TSPAN12O95859 305 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 CHRM3P20309 590 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 ITGALP20701 1170 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 EEF1DP29692 281 aaKnown RBP14.84□□□□□ -0.03
CBX3-202ENST00000396386 GKP32189 559 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 BMPR1AP36894 532 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 NAA20P61599 178 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 TEAD2Q15562 447 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 FUT11Q495W5 492 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 DGKKQ5KSL6 1271 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 CLEC6AQ6EIG7 209 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 PGM2L1Q6PCE3 622 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 PSRC1Q6PGN9 363 aaPredicted RBP14.84□□□□□ -0.03
CBX3-202ENST00000396386 CHSY3Q70JA7 882 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 RTL10Q7L3V2 364 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 GRIN3AQ8TCU5 1115 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 BADQ92934 168 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 FUBP1Q96AE4 644 aaKnown RBP14.84□□□□□ -0.03
CBX3-202ENST00000396386 TCEAL4Q96EI5 215 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 TUBGCP5Q96RT8 1024 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 TTC1Q99614 292 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 TMEM106CQ9BVX2 250 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 TLR9Q9NR96 1032 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 NDE1Q9NXR1 346 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 GALPQ9UBC7 116 aa14.84□□□□□ -0.03
CBX3-202ENST00000396386 ANGPTL2Q9UKU9 493 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms