RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 TMEM63CQ9P1W3 806 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 CPNE7Q9UBL6 633 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 UBA2Q9UBT2 640 aaPredicted RBP13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 OSGIN2Q9Y236 505 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 SLC30A1Q9Y6M5 507 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 SEC16AO15027 2179 aa13.52□□□□□ -0.25
VCPKMT-201ENST00000395859 KIF1CO43896 1103 aaKnown RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 DNAJC6O75061 913 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 NELFEP18615 380 aaKnown RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 LHCGRP22888 699 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 PPM1FP49593 454 aaPredicted RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 RPS15P62841 145 aaKnown RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 POLR2LP62875 67 aaKnown RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 PARP15Q460N3 678 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 FOXD4L5Q5VV16 416 aaPredicted RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 DOK6Q6PKX4 331 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 Q6ZVL8 140 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 MED25Q71SY5 747 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 TRIM59Q8IWR1 403 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 UMODL1-AS1Q8N2C9 162 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 ZBTB2Q8N680 514 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 TSEN2Q8NCE0 465 aaKnown RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 FNIP1Q8TF40 1166 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 ITLN2Q8WWU7 325 aaPredicted RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 FOXD4L4Q8WXT5 416 aaPredicted RBP13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 TGM7Q96PF1 710 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 HERPUD2Q9BSE4 406 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 SYNCQ9H7C4 482 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 PLCB1Q9NQ66 1216 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 CNTRLQ7Z7A1 2325 aa13.51□□□□□ -0.25
VCPKMT-201ENST00000395859 KIR2DS5A0A0G2JLQ3 304 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 A0A0G2JNG1 304 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 A6NL46 340 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 PPP1R3GB7ZBB8 358 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 J3KR12 359 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 KIR2DS3K7RE56 304 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 PSMD11O00231 422 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 HTRA2O43464 458 aaPredicted RBP13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 PRICKLE3O43900 615 aaPredicted RBP13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 PRAMEF11O60813 436 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 F3P13726 295 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 BPIP17213 487 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 CLCN1P35523 988 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 PTK2Q05397 1052 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 KIR2DS5Q14953 304 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNF630Q2M218 657 aaPredicted RBP13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNF658Q5TYW1 1059 aaPredicted RBP13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 RAET1GQ6H3X3 334 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 TRIM74Q86UV6 250 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 CCDC185Q8N715 623 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 RELTQ969Z4 430 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 C18orf8Q96DM3 657 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 SLC41A2Q96JW4 573 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 STN1Q9H668 368 aaKnown RBP13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 LRRC19Q9H756 370 aa13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
VCPKMT-201ENST00000395859 UBXN7O94888 489 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 CAPN1P07384 714 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 EDN3P14138 238 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 TNFAIP3P21580 790 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 VIPR1P32241 457 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 VAV2P52735 878 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 ATP11AP98196 1134 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 APBA1Q02410 837 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 BCL2L1Q07817 233 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 NSUN2Q08J23 767 aaKnown RBP eCLIP13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 GPS2Q13227 327 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 ANO6Q4KMQ2 910 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 FAM69BQ5VUD6 431 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 LCN10Q6JVE6 187 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 BNC2Q6ZN30 1099 aaPredicted RBP13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 RFLNAQ6ZTI6 216 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 TMEM26Q6ZUK4 368 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 MARK2Q7KZI7 788 aaKnown RBP13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 PHLDB2Q86SQ0 1253 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 NLRP8Q86W28 1048 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 ZNF354CQ86Y25 554 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 GALNT13Q8IUC8 556 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 ARFGAP1Q8N6T3 406 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 SLC38A9Q8NBW4 561 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 CENPIQ92674 756 aaPredicted RBP13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 NTAN1Q96AB6 310 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 EPHA6Q9UF33 1036 aa13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 CNOT8Q9UFF9 292 aaKnown RBP13.49□□□□□ -0.25
VCPKMT-201ENST00000395859 A0A1B0GUH1 482 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 RAB40ALP0C0E4 278 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 FOLR1P15328 257 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 TYRP1P17643 537 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 CAPN3P20807 821 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 CA5AP35218 305 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 CAPZBP47756 277 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 RAPSNQ13702 412 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 C15orf59Q2T9L4 293 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 CCDC14Q49A88 953 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 CCDC40Q4G0X9 1142 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 C2CD6Q53TS8 623 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 FJX1Q86VR8 437 aa13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 BPHLQ86WA6 291 aaPredicted RBP13.48□□□□□ -0.25
VCPKMT-201ENST00000395859 EMC1Q8N766 993 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms