RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 DRGXA6NNA5 263 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 SUPT3HB4E1H0 165 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 ACOX3O15254 700 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 DUSP11O75319 330 aaKnown RBP18.75■□□□□ 0.59
CBX1-202ENST00000393408 SUPT3HO75486 399 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 RASAL1O95294 804 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 PRSS56P0CW18 603 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 ACVRL1P37023 503 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 MRPL19P49406 292 aaKnown RBP18.75■□□□□ 0.59
CBX1-202ENST00000393408 GSK3BP49841 420 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 ECT2LQ008S8 904 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 BTG3Q14201 252 aaPredicted RBP18.75■□□□□ 0.59
CBX1-202ENST00000393408 SETMARQ53H47 684 aaPredicted RBP18.75■□□□□ 0.59
CBX1-202ENST00000393408 SPATA19Q7Z5L4 167 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 EGFL6Q8IUX8 553 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 FBXO39Q8N4B4 442 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 STAG3L4Q8TBR4 150 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 MUC13Q9H3R2 512 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 SEMA4BQ9NPR2 832 aaPredicted RBP18.75■□□□□ 0.59
CBX1-202ENST00000393408 RNF112Q9ULX5 631 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 OAZ3Q9UMX2 235 aa18.75■□□□□ 0.59
CBX1-202ENST00000393408 ASPDHA6ND91 283 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 TBX18O95935 607 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 RPS17P08708 135 aaKnown RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 C7P10643 843 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 THPOP40225 353 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 ZFP36L2P47974 494 aaKnown RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 LPIN1Q14693 890 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 TBC1D25Q3MII6 688 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 PAQR3Q6TCH7 311 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 PTRH1Q86Y79 214 aaKnown RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 C8orf48Q96LL4 319 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 MUC3BQ9H195 1237 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 SYTL2Q9HCH5 934 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 INTS10Q9NVR2 710 aaKnown RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 MED16Q9Y2X0 877 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 OAS3Q9Y6K5 1087 aaKnown RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 A0A0J9YVX5 310 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 RNF103-CHMP3A0A140T963 221 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 TCRBV5S2A0A599 114 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 B4GALT3O60512 393 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 PRAMEF11O60813 436 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 ECI2O75521 394 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 NFYCQ13952 458 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 RCAN2Q14206 197 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 TRIP4Q15650 581 aaPredicted RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 ZBED5Q49AG3 693 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 DHRS4L2Q6PKH6 230 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 GPR141Q7Z602 305 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 TRPV1Q8NER1 839 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 CDKN2AIPNLQ96HQ2 116 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 TEX37Q96LM6 180 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 C8orf4Q9NR00 106 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 AIG1Q9NVV5 245 aa18.74■□□□□ 0.59
CBX1-202ENST00000393408 HEMK1Q9Y5R4 338 aaPredicted RBP18.74■□□□□ 0.59
CBX1-202ENST00000393408 RHOBTB1O94844 696 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 CYBBP04839 570 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 MTHFD1P11586 935 aaKnown RBP18.73■□□□□ 0.59
CBX1-202ENST00000393408 FCGR1AP12314 374 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 GRK4P32298 578 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 ZNF235Q14590 738 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 CYP51A1Q16850 503 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 RABL3Q5HYI8 236 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 TMTC4Q5T4D3 741 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 ANKS6Q68DC2 871 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 DNAJB14Q8TBM8 379 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 VPS33AQ96AX1 596 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 ZNF599Q96NL3 588 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 RPRD1AQ96P16 312 aaPredicted RBP18.73■□□□□ 0.59
CBX1-202ENST00000393408 PHF12Q96QT6 1004 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 ALG2Q9H553 416 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 TIMM22Q9Y584 194 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 LCHNA4D1U4 455 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 INPP4BO15327 924 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 CRCPO75575 148 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 PYGLP06737 847 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 KCNK10P57789 538 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 ESRRGP62508 458 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 FKBP1BP68106 108 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 GRIK2Q13002 908 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 FBXO48Q5FWF7 155 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 MIB1Q86YT6 1006 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 SEPT8Q92599 483 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 FAM50BQ9Y247 325 aa18.73■□□□□ 0.59
CBX1-202ENST00000393408 UBA6A0AVT1 1052 aaPredicted RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 EEDO75530 441 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 OAZ2O95190 189 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 OR1E1P30953 314 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 FMO4P31512 558 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 RFC2P35250 354 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 YBEYP58557 167 aaPredicted RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 LIPEQ05469 1076 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 TSNQ15631 228 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 XKR7Q5GH72 579 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 PAGE3Q5JUK9 113 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 CLVS1Q8IUQ0 354 aaPredicted RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 PAPD5Q8NDF8 572 aaKnown RBP18.72■□□□□ 0.59
CBX1-202ENST00000393408 ISOC1Q96CN7 298 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 MYEOVQ96EZ4 313 aa18.72■□□□□ 0.59
CBX1-202ENST00000393408 FUBP3Q96I24 572 aaKnown RBP eCLIP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms