RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 COL5A3P25940 1745 aaPredicted RBP16.43■□□□□ 0.22
SNX9-201ENST00000392185 ANKDD1BA6NHY2 528 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 NBNO60934 754 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SLC20A2Q08357 652 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 KLF10Q13118 480 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SERINC3Q13530 473 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 WASHC2DQ5SRD0 308 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TRNP1Q6NT89 227 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TAS1R1Q7RTX1 841 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 PIM3Q86V86 326 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TSSK3Q96PN8 268 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TSC22D3Q99576 134 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 NPAS2Q99743 824 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 EBF4Q9BQW3 602 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 GGA2Q9UJY4 613 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 PCDHB1Q9Y5F3 818 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 ANKRD66B4E2M5 251 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SLC31A1O15431 190 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 KRT36O76013 467 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SIX3O95343 332 aaPredicted RBP16.43■□□□□ 0.22
SNX9-201ENST00000392185 PRNPP04156 253 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 GMPRP36959 345 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 PSME3P61289 254 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TRAF2Q12933 501 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 MPP2Q14168 576 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TAF1AQ15573 450 aaPredicted RBP16.43■□□□□ 0.22
SNX9-201ENST00000392185 CPA6Q8N4T0 437 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 ZNF555Q8NEP9 628 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SEC14L1Q92503 715 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 CLPTM1LQ96KA5 538 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 RAD9AQ99638 391 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 PCDH12Q9NPG4 1184 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 AASDHPPTQ9NRN7 309 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 TMEM248Q9NWD8 314 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 SORCS3Q9UPU3 1222 aa16.43■□□□□ 0.22
SNX9-201ENST00000392185 CCNHP51946 323 aaPredicted RBP16.42■□□□□ 0.22
SNX9-201ENST00000392185 DSG1Q02413 1049 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 PRKG2Q13237 762 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 PRKD1Q15139 912 aaPredicted RBP16.42■□□□□ 0.22
SNX9-201ENST00000392185 CYP2A13Q16696 494 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 SAMD4BQ5PRF9 694 aaKnown RBP16.42■□□□□ 0.22
SNX9-201ENST00000392185 LYPLAL1Q5VWZ2 237 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 MTSS1LQ765P7 747 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 PNPLA1Q8N8W4 532 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 OR2AP1Q8NGE2 309 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 C7orf26Q96N11 449 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 SH3GL1Q99961 368 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 RAD18Q9NS91 495 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 KCTD5Q9NXV2 234 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 AHSPQ9NZD4 102 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 VPS51Q9UID3 782 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 ZNF711Q9Y462 761 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 H3BM21 787 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 CLDN7O95471 211 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 RPN2P04844 631 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 SLC35G4P0C7Q5 338 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 COX7A2P14406 83 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 TYRP14679 529 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 RPIAP49247 311 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 CNTN1Q12860 1018 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 NAE1Q13564 534 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 ARSIQ5FYB1 569 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 ZYG11AQ6WRX3 759 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 GK5Q6ZS86 529 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 ZC3HC1Q86WB0 502 aaKnown RBP16.42■□□□□ 0.22
SNX9-201ENST00000392185 ATL1Q8WXF7 558 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 TRMOQ9BU70 441 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 SEMA6AQ9H2E6 1030 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 SNX6Q9UNH7 406 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 PTPRZ1P23471 2315 aaPredicted RBP16.42■□□□□ 0.22
SNX9-201ENST00000392185 FAM189A1O60320 539 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 CYP11A1P05108 521 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 DPY19L2P1Q6NXN4 242 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 CFAP206Q8IYR0 622 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 CLDND1Q9NY35 253 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 MTRRQ9UBK8 725 aa16.42■□□□□ 0.22
SNX9-201ENST00000392185 EIF2B4Q9UI10 523 aaKnown RBP16.42■□□□□ 0.22
SNX9-201ENST00000392185 LEFTY2O00292 366 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 PRAMEF11O60813 436 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 STC2O76061 302 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 CNPP09543 421 aaKnown RBP16.41■□□□□ 0.22
SNX9-201ENST00000392185 DMC1Q14565 340 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 RFTN1Q14699 578 aaPredicted RBP16.41■□□□□ 0.22
SNX9-201ENST00000392185 PAQR9Q6ZVX9 377 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 UBR7Q8N806 425 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 ZNF599Q96NL3 588 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 EBF3Q9H4W6 596 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 NOL11Q9H8H0 719 aaKnown RBP16.41■□□□□ 0.22
SNX9-201ENST00000392185 IPPKQ9H8X2 491 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 ZNF556Q9HAH1 456 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 FETUBQ9UGM5 382 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 VPS4BO75351 444 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 STK16O75716 305 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 EIF2S1P05198 315 aaKnown RBP16.41■□□□□ 0.22
SNX9-201ENST00000392185 NRG1Q02297 640 aaPredicted RBP16.41■□□□□ 0.22
SNX9-201ENST00000392185 SLC34A1Q06495 639 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 DPYSQ14117 519 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 MAPKAPK3Q16644 382 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 ZBTB2Q8N680 514 aa16.41■□□□□ 0.22
SNX9-201ENST00000392185 TNIP2Q8NFZ5 429 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms