RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 CALCOCO1Q9P1Z2 691 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 KLHL42Q9P2K6 505 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 B4GALT6Q9UBX8 382 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC9A2Q9UBY0 812 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 STEAP1Q9UHE8 339 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 POLG2Q9UHN1 485 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 HERC5Q9UII4 1024 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TBX21Q9UL17 535 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PADI1Q9ULC6 663 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 WDR37Q9Y2I8 494 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 JRKLQ9Y4A0 524 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 SEC23IPQ9Y6Y8 1000 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 MEGF6O75095 1541 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF407Q9C0G0 2248 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNFX1Q9P2E3 1918 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 TEP1Q99973 2627 aaKnown RBP-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 UNC79Q9P2D8 2635 aa-0.34□□□□□ -2.46
TRAJ28-201ENST00000390509 PDS5AQ29RF7 1337 aaKnown RBP-0.35□□□□□ -2.46
TRAJ28-201ENST00000390509 ZANQ9Y493 2812 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RNF213Q63HN8 5207 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 POGZQ7Z3K3 1410 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CELSR1Q9NYQ6 3014 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGKV1D-42A0A075B6H8 117 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGLV4-69A0A075B6H9 119 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 LOC105371242A0A075B767 164 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHV4-30-2A0A087WSY4 118 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 TRAV40A0A0B4J280 105 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHV4-61A0A0C4DH41 118 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGKV1-9A0A0C4DH69 117 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGKV1-6A0A0C4DH72 117 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 A0A0G2JN53 185 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 LCHNA4D1U4 455 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CTAGE9A4FU28 777 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM231BA6NCW3 169 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 GOLGA6L9A6NEM1 432 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RRN3P2A6NIE6 340 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SHISA7A6NL88 538 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 ZFP92A6NM28 416 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 C15orf61A6NNL5 157 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 NT5C1B-RDH14C9J2C7 533 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 FAM157AC9JC47 383 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 PI4K2BG5E9Z4 385 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 GFYI3L273 518 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 K7ENM7 598 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MYO1CO00159 1063 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 PLOD2O00469 737 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SOCS6O14544 535 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 HSPB6O14558 160 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF197O14709 1029 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 WNT9BO14905 357 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SMAD7O15105 426 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC22A2O15244 555 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CD3EAPO15446 510 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MSH4O15457 936 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RNMTO43148 476 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 HSPA12AO43301 675 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SEC14L5O43304 696 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 EMC8O43402 210 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 TGM5O43548 720 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 PLRG1O43660 514 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SGTAO43765 313 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SRPX2O60687 465 aaPredicted RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SNX2O60749 519 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 GAS7O60861 476 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 SRGAP2O75044 1071 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 KHDRBS3O75525 346 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 GPX5O75715 221 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RGS11O94810 467 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 TMCC1O94876 653 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 UNC5CO95185 931 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RCBTB2O95199 551 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CCNDBP1O95273 360 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RASAL1O95294 804 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 GLP2RO95838 553 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 NGFP01138 241 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 IGHV4-59P01825 116 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 PARP1P09874 1014 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 FTH1P19P0C7X4 201 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CTAGE8P0CG41 777 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM225BP0DP42 221 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 HARSP12081 509 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MYOD1P15172 320 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CSF2RAP15509 400 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 CRISP2P16562 243 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP2A2P16615 1042 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 NCLP19338 710 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MSH3P20585 1137 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 NPR2P20594 1047 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MAGP20916 626 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MALP21145 153 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 S1PR1P21453 382 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MSR1P21757 451 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MMP8P22894 467 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 MCCP23508 829 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 DCTDP32321 178 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 RFC1P35251 1148 aaPredicted RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 AHRP35869 848 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 GGT5P36269 586 aa-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 LONP1P36776 959 aaKnown RBP-0.35□□□□□ -2.47
TRAJ28-201ENST00000390509 TGFBR2P37173 567 aa-0.35□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms