RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 TMEM81Q6P7N7 255 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ANKS3Q6ZW76 656 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ADGRF2Q8IZF7 708 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ADAM32Q8TC27 787 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 CPT1BQ92523 772 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 FOXJ1Q92949 421 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 MUL1Q969V5 352 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 OR52B2Q96RD2 323 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 CGRRF1Q99675 332 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 MRPL4Q9BYD3 311 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 COG4Q9H9E3 785 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 EFCAB1Q9HAE3 211 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 C1orf112Q9NSG2 853 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 EVA1BQ9NVM1 165 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 RAB20Q9NX57 234 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 GTF2IRD1Q9UHL9 959 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SCML1Q9UN30 329 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 AUP1Q9Y679 476 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 STON1Q9Y6Q2 735 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 FAM149AA5PLN7 773 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 RGS20O76081 388 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 LSM8O95777 96 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 STAU1O95793 577 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SELLP14151 372 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 HTR7P34969 479 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 STAT5BP51692 787 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 GTF2A2P52657 109 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 MYL6P60660 151 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 VBP1P61758 197 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 TFAMQ00059 246 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SCRN3Q0VDG4 424 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 CBX2Q14781 532 aaPredicted RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SWSAP1Q6NVH7 229 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 BRAT1Q6PJG6 821 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 EPGNQ6UW88 154 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SLC26A11Q86WA9 606 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 PHC2Q8IXK0 858 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 DHRSXQ8N5I4 330 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 NAT8LQ8N9F0 302 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 MCUQ8NE86 351 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 DEDD2Q8WXF8 326 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 CIDECQ96AQ7 238 aaPredicted RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ZHX1-C8orf76Q96EF9 292 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 POLR3FQ9H1D9 316 aaPredicted RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 IARS2Q9NSE4 1012 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 SLC39A1Q9NY26 324 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 ADA2Q9NZK5 511 aa7.46□□□□□ -1.22
CDKL5-201ENST00000379989 NOCTQ9UK39 431 aaKnown RBP7.46□□□□□ -1.22
CDKL5-201ENST00000379989 RNF103-CHMP3A0A140T963 221 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CIB4A0PJX0 185 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 HMX3A6NHT5 357 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 ZNF487B1APH4 448 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 KBTBD13C9JR72 458 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TMEM63AO94886 807 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 INMTO95050 263 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 IFNB1P01574 187 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CD58P19256 250 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CD68P34810 354 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CRHR1P34998 444 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 GGT5P36269 586 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 FSTL1Q12841 308 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 GPR50Q13585 617 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 ATP6AP1Q15904 470 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 UGP2Q16851 508 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 ZACNQ401N2 412 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 MTERF2Q49AM1 385 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CELF3Q5SZQ8 465 aaKnown RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 UNC5DQ6UXZ4 953 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TLK2Q86UE8 772 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TBC1D21Q8IYX1 336 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CNDP1Q96KN2 507 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TEKT5Q96M29 485 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PHOX2BQ99453 314 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TMEM117Q9H0C3 514 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 POLR3BQ9NW08 1133 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 TAS2R9Q9NYW1 312 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PRKAG2Q9UGJ0 569 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 SEPT9Q9UHD8 586 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 LINC00862A6NCI5 91 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CXorf49A8MYA2 514 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 K7ERI5 159 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 AKR7A2O43488 359 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 HOXD8P13378 290 aaPredicted RBP7.45□□□□□ -1.22
CDKL5-201ENST00000379989 AXLP30530 894 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 HMGCLP35914 325 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 ELK3P41970 407 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 MAPKAPK2P49137 400 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PRIM2P49643 509 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 NKX3-2P78367 333 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 MPP1Q00013 466 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 SLAMF1Q13291 335 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 ART3Q13508 389 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 EFR3AQ14156 821 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 LIPIQ6XZB0 460 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CFAP77Q6ZQR2 320 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PPIL6Q8IXY8 311 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 PPM1NQ8N819 430 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 WDR48Q8TAF3 677 aa7.45□□□□□ -1.22
CDKL5-201ENST00000379989 CANT1Q8WVQ1 401 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms