RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 LAS2Q8IYD9 372 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ZCCHC10Q8TBK6 192 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ARMC5Q96C12 935 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SLC25A36Q96CQ1 311 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ERVK-5Q9HDB9 667 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 MAP4K5Q9Y4K4 846 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 MEN1O00255 615 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 RGL2O15211 777 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 MICAL2O94851 1124 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 FGBP02675 491 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 CHRM5P08912 532 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 PSKH1P11801 424 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 NIPAL4Q0D2K0 466 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 NDUFA9Q16795 377 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 FAM46CQ5VWP2 391 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 C3orf67Q6ZVT6 689 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 OXNAD1Q96HP4 312 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 CDC42EP4Q9H3Q1 356 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 DPEP2Q9H4A9 486 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ATP13A3Q9H7F0 1226 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 TNPO3Q9Y5L0 923 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 IRGMA1A4Y4 181 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 C22orf31O95567 290 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 AZGP1P25311 298 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 NKAPLQ5M9Q1 402 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 SLC2A7Q6PXP3 512 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 RAB43Q86YS6 212 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 GTF3C2Q8WUA4 911 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 BPIFA3Q9BQP9 254 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 LGR4Q9BXB1 951 aa13.24□□□□□ -0.29
HIPK3-202ENST00000379016 POLR1EQ9GZS1 481 aaKnown RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 POLR3BQ9NW08 1133 aaPredicted RBP13.24□□□□□ -0.29
HIPK3-202ENST00000379016 A0A1B0GVC2 190 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PAPSS2O95340 614 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 GSTT2BP0CG30 244 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 HGFP14210 728 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 NELFEP18615 380 aaKnown RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 KLRC1P26715 233 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 MAP2K5Q13163 448 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 SLC13A2Q13183 592 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 CARD16Q5EG05 197 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 MPZL3Q6UWV2 235 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 FRMD8P1Q9BZ68 369 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 C11orf16Q9NQ32 467 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 IFT80Q9P2H3 777 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PLEKHG2Q9H7P9 1386 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ANKRD34BA5PLL1 514 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 HSBP1L1C9JCN9 74 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 TPP1O14773 563 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 DPEP1P16444 411 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 TMEM11P17152 192 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PAX7P23759 505 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 CRADDP78560 199 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 MAPK7Q13164 816 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 STXBP5Q5T5C0 1151 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ARPINQ7Z6K5 226 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 BAP1Q92560 729 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 EZH1Q92800 747 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ZNRF3Q9ULT6 936 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ERVV-1B6SEH8 477 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 RAD51DO75771 328 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 GRK6P43250 576 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 GPD2P43304 727 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PLEKHH3Q7Z736 793 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PHC3Q8NDX5 983 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 C2orf49Q9BVC5 232 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ARHGEF4Q9NR80 690 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 KCNN3Q9UGI6 736 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 TRPV2Q9Y5S1 764 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ACTL7BQ9Y614 415 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 AIPO00170 330 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 NDUFB10O96000 172 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 S100PP25815 95 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 CSTF1Q05048 431 aaKnown RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 CPT1BQ92523 772 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 CD101Q93033 1021 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 SLC38A3Q99624 504 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 VCPKMTQ9H867 229 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 MYOZ2Q9NPC6 264 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ASAH2Q9NR71 780 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 AP5Z1O43299 807 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 NADKO95544 446 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 DNAJA1P31689 397 aaKnown RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 CDK9P50750 372 aaKnown RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 SPDYCQ5MJ68 293 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 METTL7BQ6UX53 244 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PTPN18Q99952 460 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 WDR77Q9BQA1 342 aaPredicted RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 OSBPL2Q9H1P3 480 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 MRM3Q9HC36 420 aaKnown RBP13.23□□□□□ -0.29
HIPK3-202ENST00000379016 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 GDAP2Q9NXN4 497 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PIK3C2GO75747 1445 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 PIGNO95427 931 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 ELFN1P0C7U0 828 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 DRD4P21917 467 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 TBC1D21Q8IYX1 336 aa13.23□□□□□ -0.29
HIPK3-202ENST00000379016 AVL9Q8NBF6 648 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms