RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 ATP1A4Q13733 1029 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 OR4D1Q15615 310 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 SLC14A2Q15849 920 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 OTUD3Q5T2D3 398 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 KDELC1Q6UW63 502 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 RNF180Q86T96 592 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 SERINC5Q86VE9 423 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CCDC117Q8IWD4 279 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 C3orf58Q8NDZ4 430 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 TMEM125Q96AQ2 219 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 VPS50Q96JG6 964 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 FCRL2Q96LA5 508 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 KLHL5Q96PQ7 755 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 TSPYL2Q9H2G4 693 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 KANSL1LA0AUZ9 987 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 FUCA1P04066 466 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CST5P28325 142 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 RFC2P35250 354 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 THPOP40225 353 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CD86P42081 329 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 SERPINH1P50454 418 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CLCNKBP51801 687 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CRYBB1P53674 252 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 LIPEQ05469 1076 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 FNDC1Q4ZHG4 1894 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 PAGE3Q5JUK9 113 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 TWF2Q6IBS0 349 aaKnown RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 PRMT9Q6P2P2 845 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 C16orf87Q6PH81 154 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 SCIMPQ6UWF3 145 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 DCDC5Q6ZRR9 648 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 C14orf80Q86SX3 495 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF420Q8TAQ5 688 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CALML6Q8TD86 181 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 NT5MQ9NPB1 228 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 SLC52A3Q9NQ40 469 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 PFDN4Q9NQP4 134 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 RGS18Q9NS28 235 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 GID8Q9NWU2 228 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 SELENONQ9NZV5 590 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 IFT80Q9P2H3 777 aaPredicted RBP14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 POLG2Q9UHN1 485 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 COQ6Q9Y2Z9 468 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 TIMM22Q9Y584 194 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 CORINQ9Y5Q5 1042 aa14.06□□□□□ -0.16
CLCNKA-202ENST00000375692 TCRBV5S2A0A599 114 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 ASPDHA6ND91 283 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 CBFA2T3O75081 653 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 BAIAP3O94812 1187 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 WISP3O95389 354 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 GNRH1P01148 92 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 CD1DP15813 335 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 FUT4P22083 530 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 EEF1B2P24534 225 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF135P52742 658 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 MRPS6P82932 125 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 SFSWAPQ12872 951 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 NFYCQ13952 458 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 FAM117BQ6P1L5 589 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 TAF2Q6P1X5 1199 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 ZNF549Q6P9A3 640 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 BLOC1S3Q6QNY0 202 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 PCSK9Q8NBP7 692 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 SLAIN1Q8ND83 568 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 DDHD1Q8NEL9 900 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 ACDQ96AP0 544 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 PPP1R10Q96QC0 940 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 PAAF1Q9BRP4 392 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 ALG2Q9H553 416 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 AGO3Q9H9G7 860 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 CD320Q9NPF0 282 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 SDR39U1Q9NRG7 319 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 SAGE1Q9NXZ1 904 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 THSD7BQ9C0I4 1608 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 K7EPI3 171 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 FAM163BP0C2L3 166 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 OCM2P0CE71 109 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 OCMP0CE72 109 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 GNA12Q03113 381 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 RELAQ04206 551 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 ARTNQ5T4W7 220 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 CENPSQ8N2Z9 138 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 SGCDQ92629 289 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 MYLPFQ96A32 169 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 PABPC5Q96DU9 382 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 MUS81Q96NY9 551 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 SLC30A3Q99726 388 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 KCTD14Q9BQ13 255 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 BEGAINQ9BUH8 593 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 FANCEQ9HB96 536 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 INIPQ9NRY2 104 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 BLOC1S6Q9UL45 172 aa14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 MAGED1Q9Y5V3 778 aaPredicted RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 OAS3Q9Y6K5 1087 aaKnown RBP14.05□□□□□ -0.16
CLCNKA-202ENST00000375692 LAMA2P24043 3122 aaKnown RBP14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 FUOMA2VDF0 154 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 H0Y858 1186 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 J3KR12 359 aa14.04□□□□□ -0.16
CLCNKA-202ENST00000375692 KCNH1O95259 989 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms