RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 MCCC1Q96RQ3 725 aaPredicted RBP17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 ERVK-6Q9BXR3 956 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 C1orf21Q9H246 121 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 SUV39H2Q9H5I1 410 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 FAM50BQ9Y247 325 aa17.9■□□□□ 0.46
HLA-DQB1-201ENST00000374943 TRPC5OSA6NMA1 111 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 WASH3PC4AMC7 463 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 OR1I1O60431 355 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CA3P07451 260 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 VASPP50552 380 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CCNHP51946 323 aaPredicted RBP17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SATB1Q01826 763 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GPM6BQ13491 265 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LYPLAL1Q5VWZ2 237 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ACAD11Q709F0 780 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TAS2R42Q7RTR8 314 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 AFAP1L2Q8N4X5 818 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FAM13CQ8NE31 585 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 STAG3L4Q8TBR4 150 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CD200R1Q8TD46 325 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MAGEC3Q8TD91 643 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PHF21BQ96EK2 531 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SCRN2Q96FV2 425 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MAELQ96JY0 434 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ASB2Q96Q27 587 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 OR52B2Q96RD2 323 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TRMT6Q9UJA5 497 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CDYLQ9Y232 598 aa17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MRPS23Q9Y3D9 190 aaKnown RBP17.89■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CHD9Q3L8U1 2897 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ANKRD12Q6UB98 2062 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PRMT5O14744 637 aaPredicted RBP17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PER2O15055 1255 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SLC22A2O15244 555 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NIPSNAP2O75323 286 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PRAMEF1O95521 474 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TSPAN12O95859 305 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MTHFD2P13995 350 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ITGALP20701 1170 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 MNAT1P51948 309 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SH2D4BQ5SQS7 431 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ZNF697Q5TEC3 545 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GRAMD4Q6IC98 578 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 UGT3A1Q6NUS8 523 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TPRG1Q6ZUI0 275 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 USP45Q70EL2 814 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CUZD1Q86UP6 607 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CELF5Q8N6W0 485 aaKnown RBP17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PAF1Q8N7H5 531 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TTC1Q99614 292 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FBXO10Q9UK96 956 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 WNT6Q9Y6F9 365 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PLXNA2O75051 1894 aa17.88■□□□□ 0.45
HLA-DQB1-201ENST00000374943 KIAA1549LQ6ZVL6 1849 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NPIPB15A6NHN6 443 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GOLGA8CPA6NN73 597 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 A8MUI8 341 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 B2RBV5 119 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CLDN7O95471 211 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BMP1P13497 986 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 HNRNPLP14866 589 aaKnown RBP eCLIP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BPIP17213 487 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NCF2P19878 526 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SPAM1P38567 509 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NAA20P61599 178 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NFATC2Q13469 925 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 LSM12Q3MHD2 195 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GPR33Q49SQ1 333 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DNAL1Q4LDG9 190 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 UNC50Q53HI1 259 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 WASHC2DQ5SRD0 308 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FAM151BQ6UXP7 276 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 DPY19L3Q6ZPD9 716 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RAB44Q7Z6P3 723 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ARHGAP24Q8N264 748 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GIMAP7Q8NHV1 300 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ING5Q8WYH8 240 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NUF2Q9BZD4 464 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ZNF385DQ9H6B1 395 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 IL26Q9NPH9 171 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GTSE1Q9NYZ3 720 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 BAIAP2L1Q9UHR4 511 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 TMCO1Q9UM00 188 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 FNDC3AQ9Y2H6 1198 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GLYATL1P3A0A0U1RQE8 302 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SYCE1LA8MT33 242 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 AGAP14A8MT82 685 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 GRXCR1A8MXD5 290 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 E9PBE3 544 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 KLHL41O60662 606 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ZNF7P17097 686 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 ADSLP30566 484 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 KDSRQ06136 332 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 NAA25Q14CX7 972 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CRTC1Q6UUV9 634 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 SERPINA9Q86WD7 417 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RBFAQ8N0V3 343 aa17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 CPSF7Q8N684 471 aaKnown RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 PTGR2Q8N8N7 351 aaPredicted RBP17.87■□□□□ 0.45
HLA-DQB1-201ENST00000374943 RBM15BQ8NDT2 890 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms