RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ZBTB14O43829 449 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 NIPSNAP2O75323 286 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 ESR1P03372 595 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 UGT1A6P19224 532 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 UGT1A1P22309 533 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 UGT1A4P22310 534 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 KCNA5P22460 613 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 RPS3P23396 243 aaKnown RBP eCLIP17.41■□□□□ 0.38
SSBP3-203ENST00000371319 ATP5F1P24539 256 aaPredicted RBP17.41■□□□□ 0.38
SSBP3-203ENST00000371319 VIPR1P32241 457 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 UGT1A3P35503 534 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 UGT1A5P35504 534 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 KCNC1P48547 511 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 KDM1BQ8NB78 822 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 PIWIL2Q8TC59 973 aaKnown RBP17.41■□□□□ 0.38
SSBP3-203ENST00000371319 HCAR2Q8TDS4 363 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 PPP4R1Q8TF05 950 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 ELSPBP1Q96BH3 223 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 CHFRQ96EP1 664 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 LRIG1Q96JA1 1093 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 DRC3Q9H069 523 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 ALG9Q9H6U8 611 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 DKK3Q9UBP4 350 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 SLC12A4Q9UP95 1085 aa17.41■□□□□ 0.38
SSBP3-203ENST00000371319 NEMP2A6NFY4 417 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 A8MT66 165 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 AGAP14A8MT82 685 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 UPK3BL1B0FP48 263 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 UPK3BL2E5RIL1 263 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 VPS26AO75436 327 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 HSPA4LO95757 839 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CYP2A6P11509 494 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 LAMP2P13473 410 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ACRV1P26436 265 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 GJA4P35212 333 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SCTRP47872 440 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 RCN2Q14257 317 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 EIF4HQ15056 248 aaKnown RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 FNDC3BQ53EP0 1204 aaKnown RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ZNF805Q5CZA5 627 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 LYPLAL1Q5VWZ2 237 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CES5AQ6NT32 575 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PARM1Q6UWI2 310 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 YAF2Q8IY57 180 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 TERB1Q8NA31 727 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 GIMAP7Q8NHV1 300 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PBXIP1Q96AQ6 731 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SKA1Q96BD8 255 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 POMKQ9H5K3 350 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ZNF576Q9H609 170 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SYTL2Q9HCH5 934 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 HEY2Q9UBP5 337 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 IKZF3Q9UKT9 509 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PLA2G4CQ9UP65 541 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 TCF20Q9UGU0 1960 aaKnown RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CEP290O15078 2479 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PLXNA2O75051 1894 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PRMT5O14744 637 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PYGLP06737 847 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 HLA-EP13747 358 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ALOX15P16050 662 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PSMC3P17980 439 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CCR10P46092 362 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SPINT3P49223 89 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 NAGLUP54802 743 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 AQP5P55064 265 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ASPHQ12797 758 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 BNIP1Q12981 228 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SETDB1Q15047 1291 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 OR4D1Q15615 310 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CTC1Q2NKJ3 1217 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 GPR33Q49SQ1 333 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 MAVSQ7Z434 540 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 LSMEM2Q8N112 164 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ZNF781Q8N8C0 355 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 GBP7Q8N8V2 638 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SIDT2Q8NBJ9 832 aaKnown RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CD200R1Q8TD46 325 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 KCNJ9Q92806 393 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 FGF14Q92915 247 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ERP27Q96DN0 273 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 LRRC37BQ96QE4 947 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 SIKE1Q9BRV8 207 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 BOCQ9BWV1 1114 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 DERL2Q9GZP9 239 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 TFB2MQ9H5Q4 396 aaKnown RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 ACTR5Q9H9F9 607 aaPredicted RBP17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PCDH12Q9NPG4 1184 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 GTSE1Q9NYZ3 720 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 CRLS1Q9UJA2 301 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PCDHB1Q9Y5F3 818 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 PRSS21Q9Y6M0 314 aa17.4■□□□□ 0.38
SSBP3-203ENST00000371319 EDDM13A0A1B0GTR0 161 aa17.39■□□□□ 0.37
SSBP3-203ENST00000371319 C16orf96A6NNT2 1141 aa17.39■□□□□ 0.37
SSBP3-203ENST00000371319 ZNF195O14628 629 aa17.39■□□□□ 0.37
SSBP3-203ENST00000371319 NPHS1O60500 1241 aa17.39■□□□□ 0.37
SSBP3-203ENST00000371319 CHRNGP07510 517 aa17.39■□□□□ 0.37
SSBP3-203ENST00000371319 ZNF30P17039 623 aa17.39■□□□□ 0.37
SSBP3-203ENST00000371319 ZNF7P17097 686 aaPredicted RBP17.39■□□□□ 0.37
SSBP3-203ENST00000371319 PPARGP37231 505 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms