RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 UROSP10746 265 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 KCNE1P15382 129 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 EIF2B2P49770 351 aaKnown RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 INHBEP58166 350 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 GALNT2Q10471 571 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 SLC10A2Q12908 348 aaPredicted RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 ASRGL1Q7L266 308 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 OSBPL2Q9H1P3 480 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 ARL5AQ9Y689 179 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 LRP5O75197 1615 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 TTC24A2A3L6 582 aaPredicted RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 H3BN98 237 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 FESP07332 822 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 MAPKAPK2P49137 400 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 GALK1P51570 392 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 PITX1P78337 314 aaPredicted RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 DLG1Q12959 904 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 C1DQ13901 141 aaKnown RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 SPIDRQ14159 915 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 TRIP4Q15650 581 aaPredicted RBP11.63□□□□□ -0.55
COPA-202ENST00000368069 RGS21Q2M5E4 152 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 GALNT15Q8N3T1 639 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 ZNF540Q8NDQ6 660 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 BRSK1Q8TDC3 778 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 ITCHQ96J02 903 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 SMOQ99835 787 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 MUC13Q9H3R2 512 aa11.63□□□□□ -0.55
COPA-202ENST00000368069 LOC100506127A0A0U1RQW1 187 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 GABRDO14764 452 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ACSL4O60488 711 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 MED26O95402 600 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 GPIP06744 558 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CYP4B1P13584 511 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 MTHFRP42898 656 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 RPS9P46781 194 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 PSMD7P51665 324 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 LPIN1Q14693 890 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 NCF4Q15080 339 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 SPRYD7Q5W111 196 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 TRAPPC5Q8IUR0 188 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 KBTBD2Q8IY47 623 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 OFCC1Q8IZS5 231 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 GPR156Q8NFN8 814 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 FAM81AQ8TBF8 368 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 MIPEPQ99797 713 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 IPPKQ9H8X2 491 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ZFYVE1Q9HBF4 777 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 FKBPLQ9UIM3 349 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ZNF490Q9ULM2 529 aaPredicted RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 SAMHD1Q9Y3Z3 626 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 CCDC162PA2VCL2 907 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 IFRD1O00458 451 aaPredicted RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 TRIM24O15164 1050 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 PPP2R1BP30154 601 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CCR10P46092 362 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 GNPDA1P46926 289 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 XKR6Q5GH73 641 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 VARS2Q5ST30 1063 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 RBM20Q5T481 1227 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 CPNE9Q8IYJ1 553 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 OR13C4Q8NGS5 318 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CCDC106Q9BWC9 280 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 OSBPL6Q9BZF3 934 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CEP44Q9C0F1 390 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 LRTM1Q9HBL6 345 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 C8orf4Q9NR00 106 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 PCDHB1Q9Y5F3 818 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ZFP37Q9Y6Q3 630 aaPredicted RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 IGKV6D-21A0A0A0MT36 114 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 H3BNX3 289 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 INSIG1O15503 277 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 SIX3O95343 332 aaPredicted RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 GSNP06396 782 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CCDC159P0C7I6 412 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ALOX12P18054 663 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 IMPDH1P20839 514 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 HSPA7P48741 367 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 SLC10A7Q0GE19 358 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 SETMARQ53H47 684 aaPredicted RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 PERM1Q5SV97 790 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CASP12Q6UXS9 341 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 PARP8Q8N3A8 854 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 SIDT2Q8NBJ9 832 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 NUDT4Q9NZJ9 180 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CDV3Q9UKY7 258 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 KLHL20Q9Y2M5 609 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 SQORQ9Y6N5 450 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 KRT75O95678 551 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ZNF37AP17032 561 aaPredicted RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 OGNP20774 298 aaKnown RBP11.62□□□□□ -0.55
COPA-202ENST00000368069 GRK3P35626 688 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CCL23P55773 120 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 KCNA10Q16322 511 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 POM121L1PQ3SYA9 428 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ARMCX4Q5H9R4 360 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ASB9Q96DX5 294 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 ADI1Q9BV57 179 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 MAGEH1Q9H213 219 aa11.62□□□□□ -0.55
COPA-202ENST00000368069 CAPN10Q9HC96 672 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms