RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 EFEMP1Q12805 493 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 TRAP1Q12931 704 aaKnown RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 SLC2A7Q6PXP3 512 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 GPR180Q86V85 440 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 KLHDC8BQ8IXV7 354 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 KIAA2013Q8IYS2 634 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 PARP8Q8N3A8 854 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 OR10Q1Q8NGQ4 319 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 OR2T11Q8NH01 316 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 MIPOL1Q8TD10 442 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 LINC01599Q8WXQ3 324 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 SEMA3CQ99985 751 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 ZBED2Q9BTP6 218 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 EFHD1Q9BUP0 239 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 RPF2Q9H7B2 306 aaKnown RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 CSNK1G1Q9HCP0 422 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 FADS3Q9Y5Q0 445 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 SCN8AQ9UQD0 1980 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 C17orf102A2RUQ5 167 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 H3BMQ9 156 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 CELF2O95319 508 aaKnown RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 IL12AP29459 219 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 OR4D2P58180 307 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 LAPTM5Q13571 262 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 MARC1Q5VT66 337 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 BORAQ6PGQ7 559 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 CXCL17Q6UXB2 119 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 RTN4RL1Q86UN2 441 aaPredicted RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 CLYBLQ8N0X4 340 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 MIER2Q8N344 545 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 TANKQ92844 425 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 CCDC97Q96F63 343 aaPredicted RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 IMP4Q96G21 291 aaKnown RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 COG8Q96MW5 612 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 CATSPERBQ9H7T0 1116 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 TIMMDC1Q9NPL8 285 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 ANKRD36A6QL64 1941 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 NPEPPSL1A6NEC2 478 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 IQCF5A8MTL0 148 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 ATXN1LP0C7T5 689 aaKnown RBP10.53□□□□□ -0.72
SMC3-201ENST00000361804 CCT8P50990 548 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 MTPNP58546 118 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 LIPEQ05469 1076 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 SLC39A12Q504Y0 691 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 KCTD8Q6ZWB6 473 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 SAPCD2Q86UD0 394 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 ITIH5Q86UX2 942 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 SNX29P2Q8IUI4 249 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 LZTR1Q8N653 840 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 FAM86B1Q8N7N1 296 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 PPM1MQ96MI6 270 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 RNF145Q96MT1 663 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 RRAGCQ9HB90 399 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 TMEM165Q9HC07 324 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 NMRK2Q9NPI5 230 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 SLC8A2Q9UPR5 921 aa10.53□□□□□ -0.72
SMC3-201ENST00000361804 OR1I1O60431 355 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 HSPA8P11142 646 aaKnown RBP10.52□□□□□ -0.72
SMC3-201ENST00000361804 SLC2A3P11169 496 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 FUT4P22083 530 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 FASP25445 335 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 PSMA4P25789 261 aaKnown RBP10.52□□□□□ -0.72
SMC3-201ENST00000361804 AXLP30530 894 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 CD52P31358 61 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 AFAP1L2Q8N4X5 818 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 SLC25A51Q9H1U9 297 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 SARS2Q9NP81 518 aaKnown RBP10.52□□□□□ -0.72
SMC3-201ENST00000361804 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 PTCH2Q9Y6C5 1203 aa10.52□□□□□ -0.72
SMC3-201ENST00000361804 CRCPO75575 148 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 ZNF37AP17032 561 aaPredicted RBP10.52□□□□□ -0.73
SMC3-201ENST00000361804 MATN1P21941 496 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.73
SMC3-201ENST00000361804 PIK3CGP48736 1102 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 DGKQP52824 942 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 CD300CQ08708 224 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 OVOS1Q6IE37 1185 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 TRIM74Q86UV6 250 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 TRIM73Q86UV7 250 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 PCYOX1LQ8NBM8 494 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 TMEM125Q96AQ2 219 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 ALG2Q9H553 416 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 BPIFA1Q9NP55 256 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 AASSQ9UDR5 926 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 OAS3Q9Y6K5 1087 aaKnown RBP10.52□□□□□ -0.73
SMC3-201ENST00000361804 GOLGA8CPA6NN73 597 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 CD3EAPO15446 510 aaKnown RBP10.52□□□□□ -0.73
SMC3-201ENST00000361804 PSMD3O43242 534 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 C1RP00736 705 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 IL7RP16871 459 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 PCSK1P29120 753 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 SHMT2P34897 504 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 KPNA2P52292 529 aaKnown RBP10.52□□□□□ -0.73
SMC3-201ENST00000361804 GNA12Q03113 381 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 ATP1A4Q13733 1029 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 DSC3Q14574 896 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 SLC36A3Q495N2 470 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 SETMARQ53H47 684 aaPredicted RBP10.52□□□□□ -0.73
SMC3-201ENST00000361804 CYBRD1Q53TN4 286 aa10.52□□□□□ -0.73
SMC3-201ENST00000361804 ZC3H7AQ8IWR0 971 aaKnown RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms