RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 C8orf48Q96LL4 319 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 FBXO5Q9UKT4 447 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CLEC11AQ9Y240 323 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TNFSF13BQ9Y275 285 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 STAG3L1P0CL83 205 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CBX5P45973 191 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 OSTNP61366 133 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF311Q5JNZ3 666 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 OAFQ86UD1 273 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 MAPKAP1Q9BPZ7 522 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 LRRC4CQ9HCJ2 640 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TLR8Q9NR97 1041 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TRAPPC13A5PLN9 417 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 KLHL18O94889 574 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 AMPD1P23109 780 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SOAT1P35610 550 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CTSKP43235 329 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 BAG6P46379 1132 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ADAM15Q13444 863 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ARMC6Q6NXE6 501 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 RBFAQ8N0V3 343 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TTLQ8NG68 377 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SETD6Q8TBK2 473 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GANCQ8TET4 914 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM138Q9NPI0 162 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 PIN4Q9Y237 131 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 EIF1AYO14602 144 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PLIN3O60664 434 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CCNDBP1O95273 360 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 EIF1AXP47813 144 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 KLHL26Q53HC5 615 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 TIGD4Q8IY51 512 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SPPL2AQ8TCT8 520 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 HGH1Q9BTY7 390 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CHD5Q8TDI0 1954 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SEC22BO75396 215 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 POU1F1P28069 291 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC13A2Q13183 592 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PARP15Q460N3 678 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF404Q494X3 552 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF697Q5TEC3 545 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 HGSNATQ68CP4 663 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 C6orf89Q6UWU4 347 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 BTN2A1Q7KYR7 527 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 IRF2BP2Q7Z5L9 587 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC25A41Q8N5S1 370 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 MIOSQ9NXC5 875 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 VWA7Q9Y334 891 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 AP2A1O95782 977 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 RARRES1P49788 294 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 GAS6Q14393 721 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PLEKHN1Q494U1 663 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CCDC58Q4VC31 144 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 CHMP1BQ7LBR1 199 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PRICKLE1Q96MT3 831 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 FNDC11Q9BVV2 318 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC6A16Q9GZN6 736 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 FOLH1BQ9HBA9 442 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 NPAP1Q9NZP6 1156 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PLIN4Q96Q06 1357 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF99A8MXY4 864 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC7A4O43246 635 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 UROSP10746 265 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PFKFB4Q16877 469 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF621Q6ZSS3 439 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 C7orf43Q8WVR3 580 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 TRUB1Q8WWH5 349 aaKnown RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZUFSPQ96AP4 578 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 MAB21L2Q9Y586 359 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PEX2P28328 305 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PTPN9P43378 593 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC9A3P48764 834 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 KLF10Q13118 480 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 KCNK18Q7Z418 384 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 VRK1Q99986 396 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 HSD17B14Q9BPX1 270 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC2A11Q9BYW1 496 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SIAEQ9HAT2 523 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 NMRK2Q9NPI5 230 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SEMA3GQ9NS98 782 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 BLOC1S4Q9NUP1 217 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ADGRE2Q9UHX3 823 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ELOVL7A1L3X0 281 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 NOTOA8MTQ0 251 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 OR6B1O95007 311 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 NOMO1Q15155 1222 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 SLC22A10Q63ZE4 541 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZSCAN18Q8TBC5 510 aaPredicted RBP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 FRMD6Q96NE9 622 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF570Q96NI8 536 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ASB4Q9Y574 426 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 V9GYQ6 96 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 TRIM64CA6NLI5 447 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PROM1O43490 865 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ANXA3P12429 323 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 PRG2P13727 222 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 ZSWIM7Q19AV6 140 aa6.54□□□□□ -1.36
VPS13B-202ENST00000357162 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.54□□□□□ -1.36
VPS13B-202ENST00000357162 IDNKQ5T6J7 187 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms