RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 U3KQV3 271 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 TANC1Q9C0D5 1861 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CASTOR2A6NHX0 329 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SNAP91O60641 907 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 C1RP00736 705 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF12P17014 697 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 HRH2P25021 359 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 HOXD12P35452 270 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 IREB2P48200 963 aaKnown RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 HLCSP50747 726 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SLC10A7Q0GE19 358 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SCAPQ12770 1279 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 TWF2Q6IBS0 349 aaKnown RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF549Q6P9A3 640 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PRR23BQ6ZRT6 265 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CILP2Q8IUL8 1156 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PHYKPLQ8IUZ5 450 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ANKRD13AQ8IZ07 590 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 MINDY1Q8N5J2 469 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 C3orf58Q8NDZ4 430 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ABHD11Q8NFV4 315 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF420Q8TAQ5 688 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 FBXO30Q8TB52 745 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CHPT1Q8WUD6 406 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SLC22A17Q8WUG5 538 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 TMBIM1Q969X1 311 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CCDC126Q96EE4 140 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 B3GALT6Q96L58 329 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 FCRL2Q96LA5 508 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 DOK1Q99704 481 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ERGIC3Q9Y282 383 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 TCRBV5S2A0A599 114 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 GPR32O75388 356 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SULT1C4O75897 302 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 INMTO95050 263 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 HSD17B1P14061 328 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 LBPP18428 481 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 RPS12P25398 132 aaKnown RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PIGAP37287 484 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 DGKQP52824 942 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 GEMP55040 296 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 KCNK10P57789 538 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SEMA3AQ14563 771 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ZNF362Q5T0B9 420 aaPredicted RBP10.09□□□□□ -0.79
PTPRA-203ENST00000356147 GLYATQ6IB77 296 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 TMEM53Q6P2H8 277 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 BHLHA9Q7RTU4 235 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 SLC22A9Q8IVM8 553 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PACRGLQ8N7B6 248 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 KCTD13Q8WZ19 329 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 CCDC138Q96M89 665 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 NTN4Q9HB63 628 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PRDM8Q9NQV8 689 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ENTPD7Q9NQZ7 604 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 IPPQ9Y573 584 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PCDHGA8Q9Y5G5 932 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 ARL5AQ9Y689 179 aa10.09□□□□□ -0.79
PTPRA-203ENST00000356147 PTGESO14684 152 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CLPXO76031 633 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 MBL2P11226 248 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 MTHFD2P13995 350 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 IL12AP29459 219 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 SERPINH1P50454 418 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CLCNKBP51801 687 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 ADARB1P78563 741 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 IL1RL1Q01638 556 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 LAPTM4AQ15012 233 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 NOL9Q5SY16 702 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 BLOC1S3Q6QNY0 202 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CRTC3Q6UUV7 619 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 HACD2Q6Y1H2 254 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 DCP1BQ8IZD4 617 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 OR13C4Q8NGS5 318 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 HPS1Q92902 700 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 TMEM209Q96SK2 561 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 FUNDC2Q9BWH2 189 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 TOR3AQ9H497 397 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CARS2Q9HA77 564 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 RIC8BQ9NVN3 520 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 A0A0U1RQS6 177 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CCDC154A6NI56 674 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 ZNF701M0R085 212 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 MATN3O15232 486 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 XPNPEP2O43895 674 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 S1PR4O95977 384 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 GSTT2P0CG29 244 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 GSTT2BP0CG30 244 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 HAPLN1P10915 354 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CD1DP15813 335 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 MAGP20916 626 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CCNCP24863 283 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 HTR1BP28222 390 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 LEPRP48357 1165 aaKnown RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 CLCN5P51795 746 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 ARSFP54793 590 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 IFITM3Q01628 133 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 NRG1Q02297 640 aaPredicted RBP10.08□□□□□ -0.8
PTPRA-203ENST00000356147 BNIP2Q12982 314 aa10.08□□□□□ -0.8
PTPRA-203ENST00000356147 GALNT3Q14435 633 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms