RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 COPZ1P61923 177 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CYLC2Q14093 348 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 COL13A1Q5TAT6 717 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 CENPLQ8N0S6 344 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 TCEAL4Q96EI5 215 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 LINC00597Q9H2U6 94 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 VPS4BO75351 444 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 ERN1O75460 977 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 KRT33AO76009 404 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 JUNDP17535 347 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 PROZP22891 400 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 OVGP1Q12889 678 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 DNAJC3Q13217 504 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 SMAD4Q13485 552 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 ZNF783Q6ZMS7 281 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 NLRP14Q86W24 1093 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 RALGPS2Q86X27 583 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 PCDH19Q8TAB3 1148 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 TMEM237Q96Q45 408 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 UBDO15205 165 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 TM9SF1O15321 606 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 OTCP00480 354 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 PIM1P11309 404 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 C5AR1P21730 350 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CPSF6Q16630 551 aaKnown RBP eCLIP12.75□□□□□ -0.37
LIN54-201ENST00000340417 RALGPS1Q5JS13 557 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CDK20Q8IZL9 346 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 SRFBP1Q8NEF9 429 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 ITFG1Q8TB96 612 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 TEKT5Q96M29 485 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 AARSD1Q9BTE6 412 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 PCBD2Q9H0N5 130 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 SIX2Q9NPC8 291 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 OSER1Q9NX31 292 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CDV3Q9UKY7 258 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 CDC14AQ9UNH5 594 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 TMEM98Q9Y2Y6 226 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 ULK1O75385 1050 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 BEST1O76090 585 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 HCAR3P49019 387 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CLCNKAP51800 687 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 TUBGCP5Q96RT8 1024 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 FEM1AQ9BSK4 669 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 ZBP1Q9H171 429 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 MRPL46Q9H2W6 279 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 MRPS30Q9NP92 439 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 ATP6V1HQ9UI12 483 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 MRTO4Q9UKD2 239 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 KCNK6Q9Y257 313 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 GTPBP1O00178 669 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 OR6A2O95222 327 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 CDH2P19022 906 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 BGNP21810 368 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 MOGSQ13724 837 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 MLF2Q15773 248 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 LDB1Q86U70 411 aaPredicted RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 IL22RA1Q8N6P7 574 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 FAM120BQ96EK7 910 aaKnown RBP12.75□□□□□ -0.37
LIN54-201ENST00000340417 ARL2BPQ9Y2Y0 163 aa12.75□□□□□ -0.37
LIN54-201ENST00000340417 BANF1O75531 89 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 HLA-DQB2P05538 268 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 CASRP41180 1078 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SEPHS1P49903 392 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 GYS2P54840 703 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 MSLNQ13421 630 aaPredicted RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 TSTD2Q5T7W7 516 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 KCTD4Q8WVF5 259 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 RAD21L1Q9H4I0 556 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 DNAJC11Q9NVH1 559 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 KCNK4Q9NYG8 393 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 DTLQ9NZJ0 730 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 STOML1Q9UBI4 398 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 ARL5AQ9Y689 179 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 TRAFD1O14545 582 aaPredicted RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 KMOO15229 486 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 OR1F1O43749 312 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 TPSB2P20231 275 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 S100A3P33764 101 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 CDK7P50613 346 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 CRYMQ14894 314 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 TPSAB1Q15661 275 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SPATA6LQ8N4H0 392 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 GPR21Q99679 349 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 NDC1Q9BTX1 674 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 XYLT2Q9H1B5 865 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 CHRAC1Q9NRG0 131 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 DNMT3BQ9UBC3 853 aaKnown RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 TMCC3Q9ULS5 477 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 A0A0D9SEW6 157 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 LRP5O75197 1615 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 SLC1A6P48664 564 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 GALK1P51570 392 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 USP46P62068 366 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 PRPF38BQ5VTL8 546 aaKnown RBP12.74□□□□□ -0.37
LIN54-201ENST00000340417 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 LYSMD3Q7Z3D4 306 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 BTN2A2Q8WVV5 523 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 LRIG1Q96JA1 1093 aa12.74□□□□□ -0.37
LIN54-201ENST00000340417 WDR92Q96MX6 357 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms