RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 AFF4Q9UHB7 1163 aaKnown RBP8.8□□□□□ -1
SNCA-201ENST00000336904 APPL1Q9UKG1 709 aa8.8□□□□□ -1
SNCA-201ENST00000336904 FNDC1Q4ZHG4 1894 aaPredicted RBP8.8□□□□□ -1
SNCA-201ENST00000336904 SPEGQ15772 3267 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MYO9BQ13459 2157 aa8.8□□□□□ -1
SNCA-201ENST00000336904 A0A1W2PRU2 124 aa8.8□□□□□ -1
SNCA-201ENST00000336904 FAM149AA5PLN7 773 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MRASO14807 208 aa8.8□□□□□ -1
SNCA-201ENST00000336904 TRIM16O95361 564 aa8.8□□□□□ -1
SNCA-201ENST00000336904 PGM3O95394 542 aa8.8□□□□□ -1
SNCA-201ENST00000336904 RPL10P27635 214 aaKnown RBP8.8□□□□□ -1
SNCA-201ENST00000336904 GABRR2P28476 465 aa8.8□□□□□ -1
SNCA-201ENST00000336904 GCKP35557 465 aa8.8□□□□□ -1
SNCA-201ENST00000336904 SLC7A2P52569 658 aa8.8□□□□□ -1
SNCA-201ENST00000336904 HK3P52790 923 aa8.8□□□□□ -1
SNCA-201ENST00000336904 RING1Q06587 406 aa8.8□□□□□ -1
SNCA-201ENST00000336904 SGO1Q5FBB7 561 aa8.8□□□□□ -1
SNCA-201ENST00000336904 C6orf52Q5T4I8 152 aa8.8□□□□□ -1
SNCA-201ENST00000336904 LRRC49Q8IUZ0 686 aa8.8□□□□□ -1
SNCA-201ENST00000336904 FUNDC1Q8IVP5 155 aa8.8□□□□□ -1
SNCA-201ENST00000336904 BBS7Q8IWZ6 715 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CRIPAKQ8N1N5 446 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ZNF461Q8TAF7 563 aa8.8□□□□□ -1
SNCA-201ENST00000336904 SLC22A17Q8WUG5 538 aa8.8□□□□□ -1
SNCA-201ENST00000336904 TADA1Q96BN2 335 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CNBD2Q96M20 576 aa8.8□□□□□ -1
SNCA-201ENST00000336904 BIRC8Q96P09 236 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MRPL1Q9BYD6 325 aaKnown RBP8.8□□□□□ -1
SNCA-201ENST00000336904 EFCAB1Q9HAE3 211 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CACNA2D2Q9NY47 1150 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CD274Q9NZQ7 290 aa8.8□□□□□ -1
SNCA-201ENST00000336904 VTI1BQ9UEU0 232 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CD84Q9UIB8 345 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ZMYM5Q9UJ78 669 aa8.8□□□□□ -1
SNCA-201ENST00000336904 PCDHGA7Q9Y5G6 932 aa8.8□□□□□ -1
SNCA-201ENST00000336904 TRPC5OSA6NMA1 111 aa8.8□□□□□ -1
SNCA-201ENST00000336904 C2orf81A6NN90 581 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ZNF839A8K0R7 811 aa8.8□□□□□ -1
SNCA-201ENST00000336904 FFAR3O14843 346 aa8.8□□□□□ -1
SNCA-201ENST00000336904 GPR42O15529 346 aa8.8□□□□□ -1
SNCA-201ENST00000336904 KDELR3O43731 214 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CLDN7O95471 211 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CNPP09543 421 aaKnown RBP8.8□□□□□ -1
SNCA-201ENST00000336904 CSF2RAP15509 400 aa8.8□□□□□ -1
SNCA-201ENST00000336904 BTG3Q14201 252 aaPredicted RBP8.8□□□□□ -1
SNCA-201ENST00000336904 SLC8B1Q6J4K2 584 aa8.8□□□□□ -1
SNCA-201ENST00000336904 DET1Q7L5Y6 550 aa8.8□□□□□ -1
SNCA-201ENST00000336904 KBTBD6Q86V97 674 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MFN1Q8IWA4 741 aa8.8□□□□□ -1
SNCA-201ENST00000336904 PELI3Q8N2H9 469 aa8.8□□□□□ -1
SNCA-201ENST00000336904 RANBP9Q96S59 729 aa8.8□□□□□ -1
SNCA-201ENST00000336904 ATOH8Q96SQ7 321 aa8.8□□□□□ -1
SNCA-201ENST00000336904 C17orf80Q9BSJ5 609 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MAGEH1Q9H213 219 aa8.8□□□□□ -1
SNCA-201ENST00000336904 MTG2Q9H4K7 406 aa8.8□□□□□ -1
SNCA-201ENST00000336904 RPL26L1Q9UNX3 145 aaKnown RBP8.8□□□□□ -1
SNCA-201ENST00000336904 CCL26Q9Y258 94 aa8.8□□□□□ -1
SNCA-201ENST00000336904 SLC4A7Q9Y6M7 1214 aa8.8□□□□□ -1
SNCA-201ENST00000336904 CEP290O15078 2479 aa8.79□□□□□ -1
SNCA-201ENST00000336904 A0A1B0GVM2 712 aa8.79□□□□□ -1
SNCA-201ENST00000336904 MTX2O75431 263 aa8.79□□□□□ -1
SNCA-201ENST00000336904 RNASEH2AO75792 299 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 OR4F21O95013 312 aa8.79□□□□□ -1
SNCA-201ENST00000336904 LUC7L3O95232 432 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 CRTAMO95727 393 aa8.79□□□□□ -1
SNCA-201ENST00000336904 LYNP07948 512 aa8.79□□□□□ -1
SNCA-201ENST00000336904 NCK1P16333 377 aa8.79□□□□□ -1
SNCA-201ENST00000336904 CAPN3P20807 821 aa8.79□□□□□ -1
SNCA-201ENST00000336904 CD70P32970 193 aa8.79□□□□□ -1
SNCA-201ENST00000336904 TUFMP49411 452 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 HTR6P50406 440 aa8.79□□□□□ -1
SNCA-201ENST00000336904 KPNA2P52292 529 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 CLCQ05315 142 aa8.79□□□□□ -1
SNCA-201ENST00000336904 METTL21CQ5VZV1 264 aa8.79□□□□□ -1
SNCA-201ENST00000336904 C16orf89Q6UX73 402 aa8.79□□□□□ -1
SNCA-201ENST00000336904 CMTM8Q8IZV2 173 aa8.79□□□□□ -1
SNCA-201ENST00000336904 BBS5Q8N3I7 341 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ZNF366Q8N895 744 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ICA1LQ8NDH6 482 aa8.79□□□□□ -1
SNCA-201ENST00000336904 DNAJB14Q8TBM8 379 aa8.79□□□□□ -1
SNCA-201ENST00000336904 ADAMTS19Q8TE59 1207 aa8.79□□□□□ -1
SNCA-201ENST00000336904 LRTOMTQ8WZ04 291 aa8.79□□□□□ -1
SNCA-201ENST00000336904 FUBP1Q96AE4 644 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 VWCEQ96DN2 955 aa8.79□□□□□ -1
SNCA-201ENST00000336904 MTFMTQ96DP5 389 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 PLEKHG4BQ96PX9 1271 aa8.79□□□□□ -1
SNCA-201ENST00000336904 FEM1AQ9BSK4 669 aa8.79□□□□□ -1
SNCA-201ENST00000336904 KLHL4Q9C0H6 718 aa8.79□□□□□ -1
SNCA-201ENST00000336904 EML4Q9HC35 981 aaKnown RBP8.79□□□□□ -1
SNCA-201ENST00000336904 NLE1Q9NVX2 485 aaPredicted RBP8.79□□□□□ -1
SNCA-201ENST00000336904 TAS2R13Q9NYV9 303 aa8.79□□□□□ -1
SNCA-201ENST00000336904 STK39Q9UEW8 545 aa8.79□□□□□ -1
SNCA-201ENST00000336904 POLG2Q9UHN1 485 aa8.79□□□□□ -1
SNCA-201ENST00000336904 MBD1Q9UIS9 605 aaPredicted RBP8.79□□□□□ -1
SNCA-201ENST00000336904 ZNF225Q9UK10 706 aa8.79□□□□□ -1
SNCA-201ENST00000336904 PRSS21Q9Y6M0 314 aa8.79□□□□□ -1
SNCA-201ENST00000336904 A0A0J9YYE9 177 aa8.79□□□□□ -1
SNCA-201ENST00000336904 C1orf232A0A0U1RR37 186 aa8.79□□□□□ -1
SNCA-201ENST00000336904 TEX28O15482 410 aa8.79□□□□□ -1
SNCA-201ENST00000336904 FKBP6O75344 327 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms