RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 DUSP12Q9UNI6 340 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 MTF2Q9Y483 593 aaPredicted RBP23.14■■□□□ 1.29
TSEN54-201ENST00000333213 SLC30A1Q9Y6M5 507 aa23.14■■□□□ 1.29
TSEN54-201ENST00000333213 PHGDHO43175 533 aaKnown RBP23.13■■□□□ 1.29
TSEN54-201ENST00000333213 SYNCRIPO60506 623 aaKnown RBP23.13■■□□□ 1.29
TSEN54-201ENST00000333213 C2P06681 752 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 PMLP29590 882 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 SCTRP47872 440 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 CST6Q15828 149 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 PIP5KL1Q5T9C9 394 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 MAFAQ8NHW3 353 aaPredicted RBP23.13■■□□□ 1.29
TSEN54-201ENST00000333213 HDAC8Q9BY41 377 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 SLC6A17Q9H1V8 727 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 ASB8Q9H765 288 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 INTS10Q9NVR2 710 aaKnown RBP23.13■■□□□ 1.29
TSEN54-201ENST00000333213 MKS1Q9NXB0 559 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 SERGEFQ9UGK8 458 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 GRID1Q9ULK0 1009 aa23.13■■□□□ 1.29
TSEN54-201ENST00000333213 CCT8L1PA6NM43 557 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 AGAP14A8MT82 685 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ETV3P41162 512 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 CLCN5P51795 746 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 IRF9Q00978 393 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 TIAL1Q01085 375 aaKnown RBP eCLIP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ZKSCAN8Q15776 578 aaPredicted RBP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ERAP2Q6P179 960 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 SNX20Q7Z614 316 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 PLD6Q8N2A8 252 aaKnown RBP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 SCAMP4Q969E2 229 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ELMO2Q96JJ3 720 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 TCF12Q99081 682 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 WRAP53Q9BUR4 548 aaKnown RBP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 FAM50BQ9Y247 325 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 A0A096LPK6 155 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 TRBV5-4A0A0C4DH59 114 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 COPEO14579 308 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 SLC35E2BP0CK96 405 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 HOXB2P14652 356 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ETV4P43268 484 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 CDKN2DP55273 166 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 RPS14P62263 151 aaKnown RBP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 MRPS21P82921 87 aaKnown RBP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ZP2Q05996 745 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 E2F5Q15329 346 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 HECTD2Q5U5R9 776 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 TAS2R42Q7RTR8 314 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 TECPR1Q7Z6L1 1165 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 OR2T3Q8NH03 318 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ZNF398Q8TD17 642 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 SCG3Q8WXD2 468 aaKnown RBP23.12■■□□□ 1.29
TSEN54-201ENST00000333213 BIRC8Q96P09 236 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 PLEKHG4BQ96PX9 1271 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 ZNF358Q9NW07 568 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 MED16Q9Y2X0 877 aa23.12■■□□□ 1.29
TSEN54-201ENST00000333213 MUC3AQ02505 3323 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 ASMTLO95671 621 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 CRHR1P34998 444 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 ATP13A5Q4VNC0 1218 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 FAM46CQ5VWP2 391 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 SERPINA9Q86WD7 417 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 ADHFE1Q8IWW8 467 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 RPLP0P6Q8NHW5 317 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 MSANTD3Q96H12 275 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 VPS11Q9H270 941 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 DYRK4Q9NR20 520 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 TMPRSS11EQ9UL52 423 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 VWA7Q9Y334 891 aa23.11■■□□□ 1.29
TSEN54-201ENST00000333213 DNAJC6O75061 913 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 NDUFS3O75489 264 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 ELFN1P0C7U0 828 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 NFKBIAP25963 317 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 TTPAP49638 278 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 PTPN5P54829 565 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 TAS2R38P59533 333 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 RAB10P61026 200 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 POU4F1Q01851 419 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 MLF2Q15773 248 aaPredicted RBP23.1■■□□□ 1.29
TSEN54-201ENST00000333213 DBN1Q16643 649 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 AGBL4Q5VU57 503 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 SDE2Q6IQ49 451 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 CLEC14AQ86T13 490 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 NAT14Q8WUY8 206 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 BOCQ9BWV1 1114 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 PKD2L2Q9NZM6 624 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 NDRG2Q9UN36 371 aaKnown RBP23.1■■□□□ 1.29
TSEN54-201ENST00000333213 PLLPQ9Y342 182 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 UBA6A0AVT1 1052 aaPredicted RBP23.1■■□□□ 1.29
TSEN54-201ENST00000333213 ZWINTO95229 277 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 POLD2P49005 469 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 ZNF687Q8N1G0 1237 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 FAM111AQ96PZ2 611 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 NKIRAS1Q9NYS0 192 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 EMCNQ9ULC0 261 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 COQ6Q9Y2Z9 468 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 FADS3Q9Y5Q0 445 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 LRRK1Q38SD2 2015 aa23.1■■□□□ 1.29
TSEN54-201ENST00000333213 H0Y858 1186 aa23.09■■□□□ 1.29
TSEN54-201ENST00000333213 TM9SF1O15321 606 aa23.09■■□□□ 1.29
TSEN54-201ENST00000333213 STMN1P16949 149 aa23.09■■□□□ 1.29
TSEN54-201ENST00000333213 ITGALP20701 1170 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms