RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SMG7Q92540 1137 aaKnown RBP12.95□□□□□ -0.34
VSTM4-202ENST00000332853 PAPOLBQ9NRJ5 636 aaKnown RBP12.95□□□□□ -0.34
VSTM4-202ENST00000332853 PRPF19Q9UMS4 504 aaKnown RBP12.95□□□□□ -0.34
VSTM4-202ENST00000332853 AK5Q9Y6K8 562 aa12.95□□□□□ -0.34
VSTM4-202ENST00000332853 KAT6AQ92794 2004 aa12.95□□□□□ -0.34
VSTM4-202ENST00000332853 CCDC162PA2VCL2 907 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 VAV1P15498 845 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 PITX1P78337 314 aaPredicted RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 TNK2Q07912 1038 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 APLFQ8IW19 511 aaPredicted RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 BPIFB6Q8NFQ5 453 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 Q9Y3F1 56 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 C10orf71Q711Q0 1435 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 GPR32O75388 356 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 SNUPNO95149 360 aaKnown RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 DLGAP3O95886 979 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 PCCBP05166 539 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 LPIN1Q14693 890 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 SIRPB2Q5JXA9 342 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 C7orf61Q8IZ16 206 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 C10orf82Q8WW14 230 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 APOLD1Q96LR9 279 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 FCRL5Q96RD9 977 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 S100A14Q9HCY8 104 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 KLHL28Q9NXS3 571 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 TM7SF2O76062 418 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 GSNP06396 782 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 DGCR6Q14129 220 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 CASP12Q6UXS9 341 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 PHF21AQ96BD5 680 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 FUBP3Q96I24 572 aaKnown RBP eCLIP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 OXCT2Q9BYC2 517 aaPredicted RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 KCTD5Q9NXV2 234 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 TEX264Q9Y6I9 313 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 OR4F21O95013 312 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 ALPIP09923 528 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 POLR2JP52435 117 aaKnown RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 DDHD1Q8NEL9 900 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 OR4A15Q8NGL6 344 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 REXO5Q96IC2 774 aaKnown RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 PAAF1Q9BRP4 392 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 CADM1Q9BY67 442 aaKnown RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 FBXL21Q9UKT6 434 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 ARIH1Q9Y4X5 557 aaPredicted RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 U3KQV3 271 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 TJP1Q07157 1748 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 MYADML2A6NDP7 307 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 PIP5K1BO14986 540 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 IQCF3P0C7M6 154 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 GTF2H2Q13888 395 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 GTF2H2CQ6P1K8 395 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 MIEF2Q96C03 454 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 KLHL32Q96NJ5 620 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 TRMOQ9BU70 441 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
VSTM4-202ENST00000332853 IMP3Q9NV31 184 aaKnown RBP12.94□□□□□ -0.34
VSTM4-202ENST00000332853 CNMDO75829 334 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 EDNRBP24530 442 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 MRPS15P82914 257 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 PSRC1Q6PGN9 363 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ZFRQ96KR1 1074 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 NLNQ9BYT8 704 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ATAD3AQ9NVI7 634 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ISM1B1AKI9 464 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 FAM72CH0Y354 149 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 RECQL5O94762 991 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 MT-ND1P03886 318 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 IDH2P48735 452 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 PITRM1Q5JRX3 1037 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 FAM72AQ5TYM5 149 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 FAM72DQ6L9T8 149 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 VN1R5Q7Z5H4 357 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 DNAJB7Q7Z6W7 309 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 FAM72BQ86X60 149 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 GATAD2AQ86YP4 633 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 C8orf59Q8N0T1 100 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 PARP8Q8N3A8 854 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 OR10G6Q8NH81 332 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ADAMTS10Q9H324 1103 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 DUS2Q9NX74 493 aaKnown RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 SRRDQ9UH36 339 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 VPS51Q9UID3 782 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ANKRD36CQ5JPF3 1778 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3DA0A087WVF3 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3IA0A087WXS9 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3EA0A087X179 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3KA0A087X1G2 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3FA6NER0 549 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3LB9A6J9 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 H0YGN5 161 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3HP0C7X1 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TLE2Q04725 743 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3GQ6DHY5 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3CQ6IPX1 549 aa12.93□□□□□ -0.34
VSTM4-202ENST00000332853 TBC1D3Q8IZP1 549 aaPredicted RBP12.93□□□□□ -0.34
VSTM4-202ENST00000332853 ST13P5Q8NFI4 369 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms