RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 IQCF5A8MTL0 148 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 GJB5O95377 273 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 NCK1P16333 377 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 PAX3P23760 479 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 HOXD9P28356 352 aaPredicted RBP17.32■□□□□ 0.36
COL9A1-201ENST00000320755 CDH15P55291 814 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 PLIN5Q00G26 463 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 PRKCQQ04759 706 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 ZRANB3Q5FWF4 1079 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 SAPCD2Q86UD0 394 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 BBS5Q8N3I7 341 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 BHMTQ93088 406 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 UBA2Q9UBT2 640 aaPredicted RBP17.32■□□□□ 0.36
COL9A1-201ENST00000320755 MED16Q9Y2X0 877 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 RTN3O95197 1032 aaPredicted RBP17.32■□□□□ 0.36
COL9A1-201ENST00000320755 OXCT1P55809 520 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 NFKB2Q00653 900 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 ACVR1Q04771 509 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 LCP2Q13094 533 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 MAP7Q14244 749 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 SETMARQ53H47 684 aaPredicted RBP17.32■□□□□ 0.36
COL9A1-201ENST00000320755 RTP2Q5QGT7 225 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 PSAPL1Q6NUJ1 521 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 TAS1R1Q7RTX1 841 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 TSPAN14Q8NG11 270 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 TFB2MQ9H5Q4 396 aaKnown RBP17.32■□□□□ 0.36
COL9A1-201ENST00000320755 SYTL2Q9HCH5 934 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 CMTM6Q9NX76 183 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 FKBPLQ9UIM3 349 aa17.32■□□□□ 0.36
COL9A1-201ENST00000320755 GREB1Q4ZG55 1949 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 COL4A4P53420 1690 aaPredicted RBP17.31■□□□□ 0.36
COL9A1-201ENST00000320755 LAMA3Q16787 3333 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 ARHGAP10A1A4S6 786 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 RPLP2P05387 115 aaKnown RBP17.31■□□□□ 0.36
COL9A1-201ENST00000320755 DYNC1I2Q13409 638 aaKnown RBP17.31■□□□□ 0.36
COL9A1-201ENST00000320755 KANK2Q63ZY3 851 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 TAS2R42Q7RTR8 314 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 CBR4Q8N4T8 237 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 KIAA1191Q96A73 305 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 TMIGD2Q96BF3 282 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 ZNF696Q9H7X3 374 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 NDUFA13Q9P0J0 144 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 SLAMF8Q9P0V8 285 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 COMMD10Q9Y6G5 202 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 RNF103-CHMP3A0A140T963 221 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 INPP4BO15327 924 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 FGF4P08620 206 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 MAGEA11P43364 429 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 MAPKAPK2P49137 400 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 SGSHP51688 502 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 NFYCQ13952 458 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 TMEM173Q86WV6 379 aaPredicted RBP17.31■□□□□ 0.36
COL9A1-201ENST00000320755 CHERPQ8IWX8 916 aaKnown RBP17.31■□□□□ 0.36
COL9A1-201ENST00000320755 GPR150Q8NGU9 434 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 NUDT8Q8WV74 236 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 EEF1AKMT1Q8WVE0 214 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 ROPN1LQ96C74 230 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 LRRC58Q96CX6 371 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 ZNF597Q96LX8 424 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 TMEM74Q96NL1 305 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 HGH1Q9BTY7 390 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 OCEL1Q9H607 264 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 CD274Q9NZQ7 290 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 SEPT3Q9UH03 358 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 ASB1Q9Y576 335 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 SLC4A7Q9Y6M7 1214 aa17.31■□□□□ 0.36
COL9A1-201ENST00000320755 DHRS12A0PJE2 317 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 KERAO60938 352 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 ALDH2P05091 517 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 SLC6A2P23975 617 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 OXTRP30559 389 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 ACLYP53396 1101 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 UFM1P61960 85 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 CCSAPQ6IQ19 270 aaPredicted RBP17.3■□□□□ 0.36
COL9A1-201ENST00000320755 PHYKPLQ8IUZ5 450 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 CDYL2Q8N8U2 506 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 FAM47BQ8NA70 645 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 PCSK9Q8NBP7 692 aaKnown RBP17.3■□□□□ 0.36
COL9A1-201ENST00000320755 FATE1Q969F0 183 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 TOP1MTQ969P6 601 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 FUBP1Q96AE4 644 aaKnown RBP17.3■□□□□ 0.36
COL9A1-201ENST00000320755 HIC2Q96JB3 615 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 ZFRQ96KR1 1074 aaKnown RBP17.3■□□□□ 0.36
COL9A1-201ENST00000320755 OSBPL11Q9BXB4 747 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 PDFQ9HBH1 243 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 C2orf81A6NN90 581 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 GIPC1O14908 333 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 HTRA2O43464 458 aaPredicted RBP17.3■□□□□ 0.36
COL9A1-201ENST00000320755 VNN2O95498 520 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 EPOP01588 193 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 GNAO1P09471 354 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 OGNP20774 298 aaKnown RBP17.3■□□□□ 0.36
COL9A1-201ENST00000320755 SYVN1Q86TM6 617 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 RHEBL1Q8TAI7 183 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 USP22Q9UPT9 525 aa17.3■□□□□ 0.36
COL9A1-201ENST00000320755 FXYD1O00168 92 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 SYN3O14994 580 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 ACSL4O60488 711 aa17.29■□□□□ 0.36
COL9A1-201ENST00000320755 CLIC3O95833 236 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms