RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 KRTAP17-1Q9BYP8 105 aa4.12□□□□□ -1.75
SMCO3-201ENST00000316048 OR10A4Q9H209 315 aa4.12□□□□□ -1.75
SMCO3-201ENST00000316048 ALDH8A1Q9H2A2 487 aaPredicted RBP4.12□□□□□ -1.75
SMCO3-201ENST00000316048 TMEM184CQ9NVA4 438 aa4.12□□□□□ -1.75
SMCO3-201ENST00000316048 SEL1LQ9UBV2 794 aa4.12□□□□□ -1.75
SMCO3-201ENST00000316048 R3HDM2Q9Y2K5 976 aaKnown RBP4.12□□□□□ -1.75
SMCO3-201ENST00000316048 SHANK3Q9BYB0 1731 aa4.12□□□□□ -1.75
SMCO3-201ENST00000316048 LRP6O75581 1613 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PAPPAQ13219 1627 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 LINC01548A6NM66 108 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CDRT15L2A8MXV6 281 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PAPSS1O43252 624 aaPredicted RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 HS6ST1O60243 411 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 NDUFS3O75489 264 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 SLC25A12O75746 678 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CIAO1O76071 339 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 RGS11O94810 467 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 ADRB1P08588 477 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 C6P13671 934 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PON1P27169 355 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 MPGP29372 298 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PTGER1P34995 402 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 ARHGAP25P42331 645 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 GABRB2P47870 512 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PPP3CCP48454 512 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 SUOXP51687 545 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 TFCP2Q12800 502 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 KLF10Q13118 480 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 NTRK2Q16620 822 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 MEX3CQ5U5Q3 659 aaKnown RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PMS2CLQ68D20 193 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 ADALQ6DHV7 355 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CWC27Q6UX04 472 aaKnown RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 NKAIN3Q8N8D7 197 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 FAM98AQ8NCA5 519 aaKnown RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CEP76Q8TAP6 659 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 ERGIC1Q969X5 290 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PRRX2Q99811 253 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 GPR108Q9NPR9 543 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 THSD1Q9NS62 852 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 DECR2Q9NUI1 292 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 TMEM45AQ9NWC5 275 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PAG1Q9NWQ8 432 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CPSF2Q9P2I0 782 aaKnown RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 WDR35Q9P2L0 1181 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 ZHX1Q9UKY1 873 aaPredicted RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 TRPV2Q9Y5S1 764 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CEPT1Q9Y6K0 416 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 COL16A1Q07092 1604 aaPredicted RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 AFDNP55196 1824 aaKnown RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 ARFGEF2Q9Y6D5 1785 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 COL11A2P13942 1736 aaPredicted RBP4.11□□□□□ -1.75
SMCO3-201ENST00000316048 JCADQ9P266 1359 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 PLCH1Q4KWH8 1693 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 CDHR2Q9BYE9 1310 aa4.11□□□□□ -1.75
SMCO3-201ENST00000316048 A0A096LPK6 155 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TRBV5-3A0A0A0MS03 114 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KIR2DS5A0A0G2JLQ3 304 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 URADA6NGE7 173 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KRTAP9-7A8MTY7 169 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KIR2DS3K7RE56 304 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ADAM10O14672 748 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 HCRTR2O43614 444 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 RAMP2O60895 175 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 FRAT2O75474 233 aaPredicted RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 IGLV2-14P01704 120 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 CHRNB1P11230 501 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PCNAP12004 261 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ZNF182P17025 639 aaPredicted RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SAT1P21673 171 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 HSPA4P34932 840 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 GAD2Q05329 585 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PRPF4BQ13523 1007 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TNFAIP1Q13829 316 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KYNUQ16719 465 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SLC9C1Q4G0N8 1177 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ERMARDQ5T6L9 678 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ZNF793Q6ZN11 406 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ANKRD23Q86SG2 305 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ADGRA1Q86SQ6 560 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 FAM217AQ8IXS0 508 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 KDM1BQ8NB78 822 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 MCPH1Q8NEM0 835 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PRPF31Q8WWY3 499 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 IGSF8Q969P0 613 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 FSD1Q9BTV5 496 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 BOLA2Q9H3K6 86 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 HRH4Q9H3N8 390 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 PAPOLBQ9NRJ5 636 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 GIMAP4Q9NUV9 329 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TAB2Q9NYJ8 693 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 NOL7Q9UMY1 257 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 ITGB4P16144 1822 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 GLI3P10071 1580 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 RAD50Q92878 1312 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SLIT2O94813 1529 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 GLOD5A6NK44 160 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 TBX10O75333 385 aa4.1□□□□□ -1.75
SMCO3-201ENST00000316048 SRPRAP08240 638 aaKnown RBP4.1□□□□□ -1.75
SMCO3-201ENST00000316048 HOXB5P09067 269 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms