RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MPOP05164 745 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 EPHX1P07099 455 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ASGR2P07307 311 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 VIPR1P32241 457 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 WASP42768 502 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 POLD2P49005 469 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CDKN2DP55273 166 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SEC13P55735 322 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 POLR2LP62875 67 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 POU4F1Q01851 419 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 DLG1Q12959 904 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 RALGDSQ12967 914 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ELAVL3Q14576 367 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 N4BP2L1Q5TBK1 243 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 HHATQ5VTY9 493 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SDCCAG8Q86SQ7 713 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CENPLQ8N0S6 344 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CNPY4Q8N129 248 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 SLC44A3Q8N4M1 653 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF513Q8N8E2 541 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ARMC2Q8NEN0 867 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TMIEQ8NEW7 156 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 HCAR2Q8TDS4 363 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 DYDC1Q8WWB3 177 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 LPGAT1Q92604 370 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 PHF7Q9BWX1 381 aaPredicted RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 EPN3Q9H201 632 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 HEBP1Q9NRV9 189 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 INTS10Q9NVR2 710 aaKnown RBP6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TMEM216Q9P0N5 145 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 ITM2BQ9Y287 266 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 MED16Q9Y2X0 877 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 STON1Q9Y6Q2 735 aa6.93□□□□□ -1.3
PTCD2-201ENST00000308077 TRBV5-4A0A0C4DH59 114 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 WDR91A4D1P6 747 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SHISA7A6NL88 538 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 GOLGA8CPA6NN73 597 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SRRM3A6NNA2 597 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 NARSO43776 548 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PLIN3O60664 434 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 DNAJC6O75061 913 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 WISP3O95389 354 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PRAMEF1O95521 474 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 EGFP01133 1207 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PROCP04070 461 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CYP2A6P11509 494 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 STMN1P16949 149 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 GM2AP17900 193 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TAC1P20366 129 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 FDXRP22570 491 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 ITGB7P26010 798 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PMLP29590 882 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TIE1P35590 1138 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SPAM1P38567 509 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 MMP12P39900 470 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TNFRSF4P43489 277 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SERPINB4P48594 390 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CCT5P48643 541 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 RAB10P61026 200 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 IL9RQ01113 521 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CACNG1Q06432 222 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SRSF1Q07955 248 aaKnown RBP eCLIP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PON2Q15165 354 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SMAD2Q15796 467 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CHRNA6Q15825 494 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 DBN1Q16643 649 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PDK4Q16654 411 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PREPLQ4J6C6 727 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CTSL3PQ5NE16 218 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TMEM207Q6UWW9 146 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 RAPH1Q70E73 1250 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 DPPA4Q7L190 304 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 HSD11B1LQ7Z5J1 315 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TTC7BQ86TV6 843 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PIM3Q86V86 326 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 LRRC34Q8IZ02 419 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PBXIP1Q96AQ6 731 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CABS1Q96KC9 395 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 MAGEB18Q96M61 343 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 BIRC8Q96P09 236 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 AARSD1Q9BTE6 412 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 MECRQ9BV79 373 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 IQCGQ9H095 443 aaKnown RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TRPV5Q9NQA5 729 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 SLC30A1Q9Y6M5 507 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 PIAS3Q9Y6X2 628 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 MYO10Q9HD67 2058 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 ABCA12Q86UK0 2595 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 GLYATL1P3A0A0U1RQE8 302 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 UBA6A0AVT1 1052 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-201ENST00000308077 GMNCA6NCL1 334 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 TCP11X1B4DZS4 312 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 NDUFS3O75489 264 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 IL1BP01584 269 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 GSTA1P08263 222 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 ZNF30P17039 623 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 UGT1A6P19224 532 aa6.92□□□□□ -1.3
PTCD2-201ENST00000308077 DRD4P21917 467 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms