RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 FBXO39Q8N4B4 442 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 DQX1Q8TE96 717 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM174Q8WUU8 243 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 AURKBQ96GD4 344 aaPredicted RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 PPP1R10Q96QC0 940 aaKnown RBP14.53□□□□□ -0.08
PTPN9-201ENST00000306726 SMOQ99835 787 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 OSBPL6Q9BZF3 934 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 GTF2IRD1Q9UHL9 959 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 COQ6Q9Y2Z9 468 aa14.53□□□□□ -0.08
PTPN9-201ENST00000306726 SLC2A4P14672 509 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 ZNF26P17031 533 aaPredicted RBP14.52□□□□□ -0.08
PTPN9-201ENST00000306726 INCA1Q0VD86 236 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 C18orf21Q32NC0 220 aaPredicted RBP14.52□□□□□ -0.08
PTPN9-201ENST00000306726 ADCK1Q86TW2 530 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 LINC01465Q8N7H1 131 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 STYXQ8WUJ0 223 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 DLG3Q92796 817 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 NSMCE2Q96MF7 247 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 SEPT5Q99719 369 aaPredicted RBP14.52□□□□□ -0.08
PTPN9-201ENST00000306726 FEM1AQ9BSK4 669 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 RIBC2Q9H4K1 309 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 CRTAC1Q9NQ79 661 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 TBC1D13Q9NVG8 400 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 A0A1B0GTL3 188 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 NPEPPSL1A6NEC2 478 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 XPNPEP2O43895 674 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 HOXA11P31270 313 aaPredicted RBP14.52□□□□□ -0.08
PTPN9-201ENST00000306726 CDKN2DP55273 166 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 VAC14Q08AM6 782 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 MEP1AQ16819 746 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 UAP1L1Q3KQV9 507 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 C10orf120Q5SQS8 335 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 LINC00523Q86TU6 105 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 TMEM135Q86UB9 458 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 APBB2Q92870 758 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 HSFY1Q96LI6 401 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 GPR22Q99680 433 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 HGH1Q9BTY7 390 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 CRISPLD2Q9H0B8 497 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 PLGRKTQ9HBL7 147 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 LATS2Q9NRM7 1088 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 INVSQ9Y283 1065 aa14.52□□□□□ -0.08
PTPN9-201ENST00000306726 CFAP99D6REC4 459 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 H0Y858 1186 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 FKBP9O95302 570 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 CAPN3P20807 821 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 PROZP22891 400 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 AQP1P29972 269 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 POLR2IP36954 125 aaKnown RBP14.52□□□□□ -0.09
PTPN9-201ENST00000306726 GRM5P41594 1212 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 GPR15P49685 360 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 PGFP49763 221 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 SQLEQ14534 574 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 RAB39AQ14964 217 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 RNF19BQ6ZMZ0 732 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 FKBP9P1Q75LS8 142 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 SPATA2LQ8IUW3 424 aaPredicted RBP14.52□□□□□ -0.09
PTPN9-201ENST00000306726 MICU2Q8IYU8 434 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 METTL6Q8TCB7 284 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 CHID1Q9BWS9 393 aa14.52□□□□□ -0.09
PTPN9-201ENST00000306726 H0Y626 953 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 CDC7O00311 574 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 AZIN1O14977 448 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 ARPC2O15144 300 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 CNTN5O94779 1100 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 TRIM16O95361 564 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 SBK3P0C264 359 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 KYAT1Q16773 422 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 PSMA8Q8TAA3 256 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 TRIM15Q9C019 465 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 OLAHQ9NV23 265 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 PCDH10Q9P2E7 1040 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 ALDH1A2O94788 518 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 GLP2RO95838 553 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 FTH1P02794 183 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 CHRM5P08912 532 aaPredicted RBP14.51□□□□□ -0.09
PTPN9-201ENST00000306726 MAGEA3P43357 314 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 SERPINH1P50454 418 aaKnown RBP14.51□□□□□ -0.09
PTPN9-201ENST00000306726 DAOAP59103 153 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 SH3BP2P78314 561 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 HMBOX1Q6NT76 420 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 METTL23Q86XA0 190 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 TMEM102Q8N9M5 508 aaPredicted RBP14.51□□□□□ -0.09
PTPN9-201ENST00000306726 NRBF2Q96F24 287 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 GPATCH1Q9BRR8 931 aaKnown RBP14.51□□□□□ -0.09
PTPN9-201ENST00000306726 HERC2P3Q9BVR0 1158 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 STARD7Q9NQZ5 370 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 GID8Q9NWU2 228 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 ANAPC2Q9UJX6 822 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 SCN10AQ9Y5Y9 1956 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 H3BNH8 94 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 GDF5P43026 501 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 GEMP55040 296 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 ENPEPQ07075 957 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 PTPRNQ16849 979 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 RTP4Q96DX8 246 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 SNX27Q96L92 541 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 IFT80Q9P2H3 777 aaPredicted RBP14.51□□□□□ -0.09
PTPN9-201ENST00000306726 IGSF9Q9P2J2 1179 aa14.51□□□□□ -0.09
PTPN9-201ENST00000306726 LOC100506127A0A0U1RQW1 187 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms