RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ANAPC2Q9UJX6 822 aa13.18□□□□□ -0.3
SLC28A1-201ENST00000286749 A0A1W2PP18 115 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 A0A1W2PPW3 197 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 M0QZ92 97 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 CPT1AP50416 773 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 NRG1Q02297 640 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 LCP2Q13094 533 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 PLCL1Q15111 1095 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 COQ5Q5HYK3 327 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 AARS2Q5JTZ9 985 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 CD300LGQ6UXG3 332 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 PATL1Q86TB9 770 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SPATA2LQ8IUW3 424 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SCN4BQ8IWT1 228 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 LRRC43Q8N309 656 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 RHEBL1Q8TAI7 183 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 THAP11Q96EK4 314 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 VPS50Q96JG6 964 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SERPINB11Q96P15 392 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SEPHS2Q99611 448 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 PIF1Q9H611 641 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 IKZF3Q9UKT9 509 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 TRPM7Q96QT4 1865 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 LOC285095A0A1B0GVY8 99 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 F8W810 466 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 CYBBP04839 570 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 CYP11A1P05108 521 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 ITGB1P05556 798 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 OR4Q2P0C623 313 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 C7P10643 843 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 CD247P20963 164 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 DCKP27707 260 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SUOXP51687 545 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 TNK2Q07912 1038 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 GALNT3Q14435 633 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 NEDD8Q15843 81 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 FGD3Q5JSP0 725 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 MRNIPQ6NTE8 343 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SCIMPQ6UWF3 145 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 Q6ZNX1 250 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 KCTD8Q6ZWB6 473 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 KIAA2013Q8IYS2 634 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 FBXO39Q8N4B4 442 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SMYD1Q8NB12 490 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 C1orf74Q96LT6 269 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SLC30A3Q99726 388 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 ZYG11BQ9C0D3 744 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 TFB2MQ9H5Q4 396 aaKnown RBP13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 PRDM5Q9NQX1 630 aaPredicted RBP13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 FAIMQ9NVQ4 179 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 RNF112Q9ULX5 631 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF510Q9Y2H8 683 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 GIT1Q9Y2X7 761 aa13.17□□□□□ -0.3
SLC28A1-201ENST00000286749 SNAP91O60641 907 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 KPNA6O60684 536 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TFPTP0C1Z6 253 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF865P0CJ78 1059 aaPredicted RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 RHOQP17081 205 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 HMOX2P30519 316 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 ZFP36L2P47974 494 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 UFM1P61960 85 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TSPY1Q01534 308 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 ACVR1Q04771 509 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 RCAN2Q14206 197 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PYCR3Q53H96 274 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 SDHAF4Q5VUM1 108 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PTRH1Q86Y79 214 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF683Q8IZ20 524 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF420Q8TAQ5 688 aaPredicted RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 SEMA3CQ99985 751 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 C1orf50Q9BV19 199 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 ZNF408Q9H9D4 720 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 C8orf4Q9NR00 106 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 CATSPERZQ9NTU4 200 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 FNIP2Q9P278 1114 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 FAM50BQ9Y247 325 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TRPV2Q9Y5S1 764 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 UBA6A0AVT1 1052 aaPredicted RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 KERAO60938 352 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 RPP40O75818 363 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 LDLRP01130 860 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PRDX3P30048 256 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TIGD2Q4W5G0 525 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 MS4A13Q5J8X5 152 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TBPL2Q6SJ96 375 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PAQR3Q6TCH7 311 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TBC1D21Q8IYX1 336 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TEX26Q8N6G2 289 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 TADA1Q96BN2 335 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PLEKHG4BQ96PX9 1271 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 DOK1Q99704 481 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 AARSD1Q9BTE6 412 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 PAIP1Q9H074 479 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 MUC13Q9H3R2 512 aa13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 INTS7Q9NVH2 962 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 INTS10Q9NVR2 710 aaKnown RBP13.16□□□□□ -0.3
SLC28A1-201ENST00000286749 AIG1Q9NVV5 245 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms