RNA–Protein interactions for RNA: ENST00000274255.10

SKP2-202, Transcript of S-phase kinase associated protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKP2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-202ENST00000274255 RAB39AQ14964 217 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 AASDHQ4L235 1098 aaPredicted RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 TIGD5Q53EQ6 642 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 TMEM236Q5W0B7 351 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 HORMAD1Q86X24 394 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CLIP4Q8N3C7 705 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 NLGN2Q8NFZ4 835 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 SPPL2AQ8TCT8 520 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 PYCR2Q96C36 320 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 LINGO1Q96FE5 620 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 SNX27Q96L92 541 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CINPQ9BW66 212 aaPredicted RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 IGSF9Q9P2J2 1179 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 DNAJB4Q9UDY4 337 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 RIMS3Q9UJD0 308 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 PCDHGA7Q9Y5G6 932 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 TRIP11Q15643 1979 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CCDC162PA2VCL2 907 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 NME4O00746 187 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 HAPLN1P10915 354 aaPredicted RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 DARSP14868 501 aaKnown RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 SLC7A1P30825 629 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CDKN2DP55273 166 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CLCQ05315 142 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 MFSD10Q14728 455 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 TGFBIQ15582 683 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 GPR162Q16538 588 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 TIFABQ6ZNK6 161 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 SLC22A9Q8IVM8 553 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 SLC22A15Q8IZD6 547 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CPSF7Q8N684 471 aaKnown RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 CCDC126Q96EE4 140 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 PLEKHA8Q96JA3 519 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 ADAM2Q99965 735 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 RMI1Q9H9A7 625 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CATSPERZQ9NTU4 200 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CEP290O15078 2479 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CDK5RAP2Q96SN8 1893 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 FAM20BO75063 409 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 SERPINF2P08697 491 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CAPN3P20807 821 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 GLDCP23378 1020 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 AKT1P31749 480 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CDKN1CP49918 316 aaPredicted RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 SH3BP2P78314 561 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 XIAPP98170 497 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 ARHGAP1Q07960 439 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 HSPA14Q0VDF9 509 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CYP27C1Q4G0S4 372 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 CCDC92Q53HC0 331 aaPredicted RBP11.36□□□□□ -0.59
SKP2-202ENST00000274255 NECAB2Q7Z6G3 386 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 GATAD2AQ86YP4 633 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 SLC7A5P1Q8MH63 180 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 ZNF540Q8NDQ6 660 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 TNIP2Q8NFZ5 429 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 LRRC58Q96CX6 371 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 FAR2Q96K12 515 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 PARVBQ9HBI1 364 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
SKP2-202ENST00000274255 C17orf102A2RUQ5 167 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 PFDN6O15212 129 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 FAM189A1O60320 539 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 VPS26AO75436 327 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 CAPN1P07384 714 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 CD247P20963 164 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 PPP3CCP48454 512 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 BOP1Q14137 746 aaKnown RBP11.35□□□□□ -0.59
SKP2-202ENST00000274255 TRIP4Q15650 581 aaPredicted RBP11.35□□□□□ -0.59
SKP2-202ENST00000274255 KYAT1Q16773 422 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 TMEM135Q86UB9 458 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 RETREG3Q86VR2 466 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 CCDC117Q8IWD4 279 aaPredicted RBP11.35□□□□□ -0.59
SKP2-202ENST00000274255 SLC15A3Q8IY34 581 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 CENPSQ8N2Z9 138 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 GLT1D1Q96MS3 346 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 NPY6RQ99463 290 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 RIC8BQ9NVN3 520 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 PCDHB9Q9Y5E1 797 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 SCN9AQ15858 1988 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 LSM1O15116 133 aaKnown RBP11.35□□□□□ -0.59
SKP2-202ENST00000274255 OR1I1O60431 355 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 GSRP00390 522 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 HK2P52789 917 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 NUDT6P53370 316 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 CD300CQ08708 224 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 MAPKAPK3Q16644 382 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 FAM151BQ6UXP7 276 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 LSMEM2Q8N112 164 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 CARNMT1Q8N4J0 409 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 TAMM41Q96BW9 452 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 ZNF451Q9Y4E5 1061 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 TBX1O43435 398 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 COL6A1P12109 1028 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 DNAJB2P25686 324 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 PBLDP30039 288 aaPredicted RBP11.35□□□□□ -0.59
SKP2-202ENST00000274255 HOXA11P31270 313 aaPredicted RBP11.35□□□□□ -0.59
SKP2-202ENST00000274255 GLUD2P49448 558 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 OR4D2P58180 307 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 VBP1P61758 197 aa11.35□□□□□ -0.59
SKP2-202ENST00000274255 INCA1Q0VD86 236 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms