RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 IPPKQ9H8X2 491 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 AASDHPPTQ9NRN7 309 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 IMP3Q9NV31 184 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 CAB39Q9Y376 341 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3DA0A087WVF3 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3IA0A087WXS9 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3EA0A087X179 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3KA0A087X1G2 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3FA6NER0 549 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3LB9A6J9 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 ARVCFO00192 962 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 HCRTO43612 131 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3HP0C7X1 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 SLC25A11Q02978 314 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 CLCQ05315 142 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 INCA1Q0VD86 236 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TMEM63BQ5T3F8 832 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3GQ6DHY5 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3CQ6IPX1 549 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 GATAD2AQ86YP4 633 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 TBC1D3Q8IZP1 549 aaPredicted RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 OFCC1Q8IZS5 231 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 BORCS6Q96GS4 357 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 MPP4Q96JB8 637 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 EPB41L4BQ9H329 900 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 ZNF232Q9UNY5 417 aa13.93□□□□□ -0.18
CDH3-201ENST00000264012 COPG1Q9Y678 874 aaKnown RBP13.93□□□□□ -0.18
CDH3-201ENST00000264012 UGT1A9O60656 530 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 CST1P01037 141 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 PRNPP04156 253 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 MYL12AP19105 171 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 MAPK10P53779 464 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 TSNQ15631 228 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 FAM124AQ86V42 546 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 SERPINA9Q86WD7 417 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 C17orf64Q86WR6 236 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 HPS6Q86YV9 775 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 ZNF781Q8N8C0 355 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 KREMEN2Q8NCW0 462 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 RPL10LQ96L21 214 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 DGCR6LQ9BY27 220 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 OSBPL2Q9H1P3 480 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 NOL11Q9H8H0 719 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 UGT1A7Q9HAW7 530 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 UGT1A10Q9HAW8 530 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 UGT1A8Q9HAW9 530 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 LRTM1Q9HBL6 345 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 NUDT4Q9NZJ9 180 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 SLC27A6Q9Y2P4 619 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 TCEA3O75764 348 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 TM7SF2O76062 418 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 NUDT14O95848 222 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 NR2F1P10589 423 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 PTPN2P17706 415 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 CCR4P51679 360 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 CBX2Q14781 532 aaPredicted RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 TAS1R3Q7RTX0 852 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 OSTM1Q86WC4 334 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 ING5Q8WYH8 240 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 TCF25Q9BQ70 676 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 ETAA1Q9NY74 926 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 KIF13AQ9H1H9 1805 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 GTF2E2P29084 291 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 HSPA7P48741 367 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 RPIAP49247 311 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 USP39Q53GS9 565 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 ANXA8L1Q5VT79 327 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 EPHX4Q8IUS5 362 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 MPP5Q8N3R9 675 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 CPA6Q8N4T0 437 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 OR2T12Q8NG77 320 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 DDX1Q92499 740 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 CLPTM1LQ96KA5 538 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 SGK2Q9HBY8 427 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 SOHLH2Q9NX45 425 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 MYL12BO14950 172 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 EPHX1P07099 455 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 SLC1A2P43004 574 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 ST13P50502 369 aaKnown RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 NRG1Q02297 640 aaPredicted RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 TLE2Q04725 743 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 ATXN7L2Q5T6C5 722 aaPredicted RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 TRIM40Q6P9F5 258 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 DSELQ8IZU8 1212 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 BEND7Q8N7W2 519 aaPredicted RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 LMO3Q8TAP4 145 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 PPCDCQ96CD2 204 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 VMP1Q96GC9 406 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 PHPT1Q9NRX4 125 aaPredicted RBP13.92□□□□□ -0.18
CDH3-201ENST00000264012 FAM53CQ9NYF3 392 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 CNTN6Q9UQ52 1028 aa13.92□□□□□ -0.18
CDH3-201ENST00000264012 OR2AG2A6NM03 316 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 ZW10O43264 779 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 NDUFS2O75306 463 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 ESR1P03372 595 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 APODP05090 189 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 OGNP20774 298 aaKnown RBP13.91□□□□□ -0.18
CDH3-201ENST00000264012 WASP42768 502 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 HCAR3P49019 387 aa13.91□□□□□ -0.18
CDH3-201ENST00000264012 DGCR6Q14129 220 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms