RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 HNRNPABQ99729 332 aaKnown RBP12.93□□□□□ -0.34
SNX1-201ENST00000261889 ALOXE3Q9BYJ1 711 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 HIPK3Q9H422 1215 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 AGPAT4Q9NRZ5 378 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 CREBZFQ9NS37 354 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ZMYM5Q9UJ78 669 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 FFAR3O14843 346 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 GPR42O15529 346 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 CLASP2O75122 1294 aaKnown RBP12.93□□□□□ -0.34
SNX1-201ENST00000261889 B3GAT3O94766 335 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 C1RP00736 705 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 AQP6Q13520 282 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 RBBP7Q16576 425 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ALFQ53S48 1182 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ZNF549Q6P9A3 640 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ENPP6Q6UWR7 440 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
SNX1-201ENST00000261889 IGFN1Q86VF2 1251 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 CCDC97Q96F63 343 aaPredicted RBP12.93□□□□□ -0.34
SNX1-201ENST00000261889 CCM2LQ9NUG4 571 aaPredicted RBP12.93□□□□□ -0.34
SNX1-201ENST00000261889 ANKRD6Q9Y2G4 727 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 NRCAMQ92823 1304 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 MYLKQ15746 1914 aa12.93□□□□□ -0.34
SNX1-201ENST00000261889 NPEPPSL1A6NEC2 478 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 BTBD19C9JJ37 291 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 H2AFYO75367 372 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 GSNP06396 782 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 EFNA1P20827 205 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 CCT8P50990 548 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 ARPP19P56211 112 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 SEMG2Q02383 582 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 INPP5AQ14642 412 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 USP41Q3LFD5 358 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 C2CD4AQ8NCU7 369 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 CNIH3Q8TBE1 160 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 FRS2Q8WU20 508 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 HPS1Q92902 700 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 COX4I2Q96KJ9 171 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 IL12RB2Q99665 862 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 SMPD3Q9NY59 655 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 VPS28Q9UK41 221 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 SIP14410 1827 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 SLCO1B7G3V0H7 640 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 ALBP02768 609 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 IL12AP29459 219 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 HTR6P50406 440 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 OCA2Q04671 838 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 RFTN1Q14699 578 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 HERC3Q15034 1050 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 SLC36A3Q495N2 470 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 GTDC1Q4AE62 458 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 PAQR3Q6TCH7 311 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 SPESP1Q6UW49 350 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 ABRAXAS1Q6UWZ7 409 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 NCCRP1Q6ZVX7 275 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 LRRTM3Q86VH5 581 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 PHACTR4Q8IZ21 702 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 PCYOX1LQ8NBM8 494 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 OR52B6Q8NGF0 335 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 OR2T11Q8NH01 316 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 BIRC7Q96CA5 298 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 MTFMTQ96DP5 389 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 ADAMTS10Q9H324 1103 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 KRT87PA6NCN2 255 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 AZIN1O14977 448 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 OR1I1O60431 355 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 NOL3O60936 208 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 MITFO75030 526 aaPredicted RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 GPR32O75388 356 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 BCL10O95999 233 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 CNPP09543 421 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 HSPA1AP0DMV8 641 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 HSPA1BP0DMV9 641 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 AXLP30530 894 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 MAP2K4P45985 399 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 UGP2Q16851 508 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 FAM187BQ17R55 369 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 TRIM16LQ309B1 348 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 LRRC52Q8N7C0 313 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 NT5C3BQ969T7 300 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 ABHD8Q96I13 439 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 CCDC138Q96M89 665 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 SLC2A13Q96QE2 648 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 HEPHQ9BQS7 1158 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 EML4Q9HC35 981 aaKnown RBP12.92□□□□□ -0.34
SNX1-201ENST00000261889 CASP8AP2Q9UKL3 1982 aa12.92□□□□□ -0.34
SNX1-201ENST00000261889 A8MX80 341 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 ARVCFO00192 962 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 MLYCDO95822 493 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 GUCA1CO95843 209 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 CCNA2P20248 432 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 HK2P52789 917 aa12.91□□□□□ -0.34
SNX1-201ENST00000261889 SNX17Q15036 470 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms