RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 PAFAH1B3Q15102 231 aaKnown RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 TBR1Q16650 682 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 AMZ1Q400G9 498 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 PYCR3Q53H96 274 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 MANEAQ5SRI9 462 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 DENND2CQ68D51 928 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 TRIM74Q86UV6 250 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 SFRP1Q8N474 314 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 BMPERQ8N8U9 685 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 ARRDC2Q8TBH0 407 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 SYN2Q92777 582 aaPredicted RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 FAF2Q96CS3 445 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 AP2M1Q96CW1 435 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 WDR24Q96S15 920 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 LYSMD1Q96S90 227 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 AGAP2Q99490 1192 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 DPYSL5Q9BPU6 564 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 DDA1Q9BW61 102 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 SLC12A9Q9BXP2 914 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 TDRD1Q9BXT4 1180 aaKnown RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 POLR1EQ9GZS1 481 aaKnown RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 THAP2Q9H0W7 228 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 SUDS3Q9H7L9 328 aaPredicted RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 NT5MQ9NPB1 228 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 SEPT10Q9P0V9 454 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 VPS18Q9P253 973 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 AMACRQ9UHK6 382 aa10.25□□□□□ -0.77
VPS50-201ENST00000251739 PCYT1BQ9Y5K3 369 aaPredicted RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 RP1L1Q8IWN7 2480 aaPredicted RBP10.25□□□□□ -0.77
VPS50-201ENST00000251739 SPTBN1Q01082 2364 aaKnown RBP10.24□□□□□ -0.77
VPS50-201ENST00000251739 A0A087X0T9 212 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 A6NCN8 305 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 SMTNL1A8MU46 457 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 B4E171 279 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 GOLGA6L22H0YM25 854 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 STMND1H3BQB6 276 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 PYCARD-AS1I3L0S3 204 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 AGRPO00253 132 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 DNAJC6O75061 913 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 WISP1O95388 367 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 EML2O95834 649 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 PYGLP06737 847 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 FAM87AP0C7U9 286 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 FAM228BP0C875 321 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 ANP32AP39687 249 aaKnown RBP10.24□□□□□ -0.77
VPS50-201ENST00000251739 TSPAN7P41732 249 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 GPR1P46091 355 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 ZNF165P49910 485 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 RPL26P61254 145 aaKnown RBP10.24□□□□□ -0.77
VPS50-201ENST00000251739 GPLD1P80108 840 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 NFATC3Q12968 1075 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 PEX6Q13608 980 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 DPYSL3Q14195 570 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 FILIP1LQ4L180 1135 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 TMEM164Q5U3C3 297 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 NCBP2-AS2Q69YL0 99 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 DOK6Q6PKX4 331 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 CPNE8Q86YQ8 564 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 NRSN1Q8IZ57 195 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 AGBL5Q8NDL9 886 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 SLC37A2Q8TED4 501 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 NSMCE1Q8WV22 266 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 NKD1Q969G9 470 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 BTBD6Q96KE9 485 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 TSGA13Q96PP4 275 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 TAAR9Q96RI9 348 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 ZNF670Q9BS34 389 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 NUP85Q9BW27 656 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 SPRY4Q9C004 299 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 CLMPQ9H6B4 373 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 TMEM9Q9P0T7 183 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 IP6K2Q9UHH9 426 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 CD84Q9UIB8 345 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 ANAPC7Q9UJX3 599 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 CNOT6Q9ULM6 557 aaKnown RBP10.24□□□□□ -0.77
VPS50-201ENST00000251739 RPL26L1Q9UNX3 145 aaKnown RBP10.24□□□□□ -0.77
VPS50-201ENST00000251739 TMEM98Q9Y2Y6 226 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 B3GALT1Q9Y5Z6 326 aa10.24□□□□□ -0.77
VPS50-201ENST00000251739 GOLGA6CA6NDK9 693 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 GOLGA6BA6NDN3 693 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 FAM187AA6NFU0 413 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 MATN3O15232 486 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 ZW10O43264 779 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 HLA-DQB2P05538 268 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 GOLGA6DP0CG33 693 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 CES1P23141 567 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 UGT1A3P35503 534 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 CYP4F2P78329 520 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 DSC2Q02487 901 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 NIPAL4Q0D2K0 466 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 CLCA4Q14CN2 919 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 TDRD12Q587J7 1177 aaKnown RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 HENMT1Q5T8I9 393 aaKnown RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 NKAIN2Q5VXU1 208 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 TMEM71Q6P5X7 295 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
VPS50-201ENST00000251739 ARHGAP22Q7Z5H3 698 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 PQLC3Q8N755 202 aa10.23□□□□□ -0.77
VPS50-201ENST00000251739 ZNF592Q92610 1267 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms