RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 TCP11X1B4DZS4 312 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 I3L1I5 382 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PPEF2O14830 753 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SLC27A2O14975 620 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TOX3O15405 576 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 JRKO75564 520 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 GRAP2O75791 330 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CYP4B1P13584 511 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 EPB42P16452 691 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ACAT1P24752 427 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 MAOBP27338 520 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PSMC1P62191 440 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 HPCAP84074 193 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 FANCCQ00597 558 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PLP2Q04941 152 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SIX1Q15475 284 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PARP15Q460N3 678 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 GALNT7Q86SF2 657 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 STK40Q8N2I9 435 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 FBXL16Q8N461 479 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 RBBP8NLQ8NC74 664 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SGMS2Q8NHU3 365 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CALML6Q8TD86 181 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ST7LQ8TDW4 575 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 FAM222BQ8WU58 562 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CDKL2Q92772 493 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 EXTL1Q92935 676 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ZNF653Q96CK0 615 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 APOLD1Q96LR9 279 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 C3orf30Q96M34 536 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ZNF641Q96N77 438 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NAP1L3Q99457 506 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NOL6Q9H6R4 1146 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SEMA3GQ9NS98 782 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 HPF1Q9NWY4 346 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 A0A087WV48 116 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 OR5K3A6NET4 321 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 C3orf70A6NLC5 250 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TIMM23O14925 209 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 OR10H2O60403 315 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 RECKO95980 971 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 KRT7P08729 469 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 MYBL1P10243 752 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CKMT1AP12532 417 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 HNRNPLP14866 589 aaKnown RBP eCLIP3.51□□□□□ -1.856e-7■■■■□ 22.6
PHTF2-201ENST00000248550 CHRNB2P17787 502 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NCF2P19878 526 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SAT1P21673 171 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CSKP41240 450 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SEPHS1P49903 392 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 COPAP53621 1224 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 RPS23P62266 143 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PSPHP78330 225 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 IL1RL1Q01638 556 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 HHEXQ03014 270 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SCRN1Q12765 414 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 BLMHQ13867 455 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ERV3-1Q14264 604 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CRTC2Q53ET0 693 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PAGE2BQ5JRK9 111 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ATXN7L2Q5T6C5 722 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 JADE1Q6IE81 842 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TMEM71Q6P5X7 295 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 OPN5Q6U736 354 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 HTR3DQ70Z44 454 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 UBE2R2Q712K3 238 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SGMS1Q86VZ5 419 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CDKL3Q8IVW4 592 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 UBL4BQ8N7F7 174 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 GBP7Q8N8V2 638 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 IL17DQ8TAD2 202 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 JPH3Q8WXH2 748 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NANOS1Q8WY41 292 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 FGF14Q92915 247 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 OTUB1Q96FW1 271 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 HES6Q96HZ4 224 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ZFYVE19Q96K21 471 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TRAPPC9Q96Q05 1148 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TM6SF1Q9BZW5 370 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ATG10Q9H0Y0 220 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 MVB12BQ9H7P6 319 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NANOGQ9H9S0 305 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 POPDC2Q9HBU9 364 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SMYD2Q9NRG4 433 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 IMP3Q9NV31 184 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TRNAU1APQ9NX07 287 aaKnown RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 DNAJB4Q9UDY4 337 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 ASIC3Q9UHC3 531 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NUDT5Q9UKK9 219 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 NPHP3-ACAD11A0A0J9YXS1 232 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 CIB4A0PJX0 185 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 GOLGA8IPA6NC78 632 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 H7C0C1 242 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 K7ENP7 123 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 TRAPPC6AO75865 159 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SLC25A14O95258 325 aaPredicted RBP3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SERPINC1P01008 464 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 KRT16P08779 473 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 SLC35G6P0C7Q6 338 aa3.51□□□□□ -1.85
PHTF2-201ENST00000248550 PEPDP12955 493 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms