RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 IVDP26440 423 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 MMP12P39900 470 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 STC1P52823 247 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 KCTD11Q693B1 232 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ELMO1Q92556 727 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 HIST1H2AHQ96KK5 128 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 SMIM14Q96QK8 99 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 HIST1H2AJQ99878 128 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 H2AFJQ9BTM1 129 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 OR2AG1Q9H205 316 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 A0A0U1RQS6 177 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 A0A1W2PQF6 199 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 OR51F1A6NGY5 319 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 KDM1AO60341 852 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 STMN1P16949 149 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 HPDP32754 393 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 NSG1P42857 185 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 MAGEA6P43360 314 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ILF3Q12906 894 aaKnown RBP eCLIP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 FBXO38Q6PIJ6 1188 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 HSD11B1LQ7Z5J1 315 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 LDB1Q86U70 411 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 AADATQ8N5Z0 425 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM160A2Q8N612 972 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 CAVIN3Q969G5 261 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 HIC2Q96JB3 615 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 IRF2BPLQ9H1B7 796 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 SYTL2Q9HCH5 934 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 IL17CQ9P0M4 197 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 KLQ9UEF7 1012 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 KPNA5O15131 536 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 AP1G1O43747 822 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 BPIP17213 487 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 TMEM52BQ4KMG9 183 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ATOH1Q92858 354 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ZNF514Q96K75 400 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 PLEKHG4BQ96PX9 1271 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 FAM126AQ9BYI3 521 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ROPN1BQ9BZX4 212 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ROPN1Q9HAT0 212 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 DNAJC28Q9NX36 388 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 NOTCH4Q99466 2003 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ANTXRLA6NF34 631 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ERICH4A6NGS2 130 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 OR2AG2A6NM03 316 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 TRAFD1O14545 582 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 DPP6P42658 865 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ARRB1P49407 418 aaPredicted RBP11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 TMEM220Q6QAJ8 160 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 HEATR4Q86WZ0 1026 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ARFGAP2Q8N6H7 521 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 PPP4R1Q8TF05 950 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 EXT2Q93063 718 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ZDHHC18Q9NUE0 388 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ABCF3Q9NUQ8 709 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 ZDHHC3Q9NYG2 299 aa11.06□□□□□ -0.64
TNFAIP3-201ENST00000237289 A6NNZ2 444 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 OGNP20774 298 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 CNTFP26441 200 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 MAOBP27338 520 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PTGER3P43115 390 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 HSPA14Q0VDF9 509 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 INPP5AQ14642 412 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 MSS51Q4VC12 460 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 HHATQ5VTY9 493 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 KIAA0408Q6ZU52 694 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 RABEPKQ7Z6M1 372 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 RAB44Q7Z6P3 723 aaPredicted RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 DTD2Q96FN9 168 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 EGFL8Q99944 293 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 CARS2Q9HA77 564 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PCDHB1Q9Y5F3 818 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 TRIM49D1C9J1S8 452 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 COPEO14579 308 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 CTIFO43310 598 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PI15O43692 258 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PRLP01236 227 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PDE1CQ14123 709 aaPredicted RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 CBARPQ8N350 705 aaPredicted RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 OR2W6PQ8NHA6 318 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 GLYATL1Q969I3 302 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 CLDN23Q96B33 292 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 ALKBH8Q96BT7 664 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 GTPBP2Q9BX10 602 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 C6orf106Q9H6K1 298 aaPredicted RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 GPAMQ9HCL2 828 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 CYP4F12Q9HCS2 524 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 SLC24A2Q9UI40 661 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 TEX264Q9Y6I9 313 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 AURKAO14965 403 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 MTX2O75431 263 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 SYF2O95926 243 aaKnown RBP11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 TNFP01375 233 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 RABIFP47224 123 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PPARDQ03181 441 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 NFATC2Q13469 925 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 MAP7D1Q3KQU3 841 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 PIP5KL1Q5T9C9 394 aa11.05□□□□□ -0.64
TNFAIP3-201ENST00000237289 AGBL4Q5VU57 503 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms