RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 TSNQ15631 228 aaKnown RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 PSAPL1Q6NUJ1 521 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 DNAJB7Q7Z6W7 309 aaPredicted RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 PCDH20Q8N6Y1 951 aaKnown RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 RNF148Q8N7C7 305 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 ADCY4Q8NFM4 1077 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 RIN3Q8TB24 985 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 TRPC4APQ8TEL6 797 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 EXT2Q93063 718 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 ALG14Q96F25 216 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 DUS3LQ96G46 650 aaKnown RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 LRGUKQ96M69 825 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 NSUN5Q96P11 429 aaKnown RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 SMIM14Q96QK8 99 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 RNF208Q9H0X6 261 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 FBRSL1Q9HCM7 1045 aaKnown RBP16.08■□□□□ 0.16
UBE3D-201ENST00000237186 ADA2Q9NZK5 511 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 EPS15L1Q9UBC2 864 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 FKBPLQ9UIM3 349 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 CROTQ9UKG9 612 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 OGDHLQ9ULD0 1010 aa16.08■□□□□ 0.16
UBE3D-201ENST00000237186 ATP6AP2A0A1C7CYW4 349 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 LRRC14BA6NHZ5 514 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 PIP5K1BO14986 540 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 ATP6AP2O75787 350 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 MATN4O95460 622 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 OLFM2O95897 454 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 C8BP07358 591 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 IRF1P10914 325 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 CCL5P13501 91 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 EEF1DP29692 281 aaKnown RBP16.07■□□□□ 0.16
UBE3D-201ENST00000237186 PTGER3P43115 390 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 GRIK2Q13002 908 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 CTSL3PQ5NE16 218 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
UBE3D-201ENST00000237186 ICA1LQ8NDH6 482 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 PDLIM5Q96HC4 596 aaKnown RBP16.07■□□□□ 0.16
UBE3D-201ENST00000237186 TUBB1Q9H4B7 451 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 MAGEE1Q9HCI5 957 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 IL17CQ9P0M4 197 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 GALPQ9UBC7 116 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 MAFFQ9ULX9 164 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 DTNAQ9Y4J8 743 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 ASB3Q9Y575 518 aa16.07■□□□□ 0.16
UBE3D-201ENST00000237186 SUPT3HB4E1H0 165 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 CDC7O00311 574 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 MRASO14807 208 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 DENRO43583 198 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 RNASEH1O60930 286 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 SUPT3HO75486 399 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 UPP2O95045 317 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 ESR1P03372 595 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 PRR35P0CG20 571 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 LBPP18428 481 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 MZF1P28698 734 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 SAMD4BQ5PRF9 694 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 RARS2Q5T160 578 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 IRAK1BP1Q5VVH5 260 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 OGFOD2Q6N063 350 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 Q6ZNB5 142 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 FAM217AQ8IXS0 508 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 TCEAL8Q8IYN2 117 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 LILRA2Q8N149 483 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 SLC39A11Q8N1S5 342 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 STK40Q8N2I9 435 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 PCYOX1LQ8NBM8 494 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 ZNF483Q8TF39 744 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 TSPEARQ8WU66 669 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 KLHL32Q96NJ5 620 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 SLC30A3Q99726 388 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 GPATCH1Q9BRR8 931 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 HERC2P3Q9BVR0 1158 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 NUSAP1Q9BXS6 441 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 P2RY12Q9H244 342 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 SDR39U1Q9NRG7 319 aaPredicted RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 TRMT6Q9UJA5 497 aaKnown RBP16.06■□□□□ 0.16
UBE3D-201ENST00000237186 NDUFAF1Q9Y375 327 aa16.06■□□□□ 0.16
UBE3D-201ENST00000237186 PRORSD1PA6NEY8 169 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 H0Y626 953 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 TBL1XO60907 577 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 MLYCDO95822 493 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 UBTFL6P0CB48 400 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 MBL2P11226 248 aaPredicted RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 HDCP19113 662 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 PAX7P23759 505 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 HMGCLP35914 325 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 IL2P60568 153 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 RHDQ02161 417 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 IKBKEQ14164 716 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 GRM2Q14416 872 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 GRAMD1BQ3KR37 738 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 COQ5Q5HYK3 327 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 LINGO4Q6UY18 593 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 EFL1Q7Z2Z2 1120 aaKnown RBP16.05■□□□□ 0.16
UBE3D-201ENST00000237186 MIER2Q8N344 545 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 OR9I1Q8NGQ6 314 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 PIP4K2CQ8TBX8 421 aa16.05■□□□□ 0.16
UBE3D-201ENST00000237186 CD200R1Q8TD46 325 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms